RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 TMEM38BQ9NVV0 291 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 MOKQ9UQ07 419 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 CACNA1CQ13936 2221 aa18.43■□□□□ 0.54
LSM6-207ENST00000515311 CLUP10909 449 aa18.43■□□□□ 0.54
LSM6-207ENST00000515311 BLVRAP53004 296 aa18.43■□□□□ 0.54
LSM6-207ENST00000515311 ISL1P61371 349 aa18.43■□□□□ 0.54
LSM6-207ENST00000515311 ARF1P84077 181 aaKnown RBP18.43■□□□□ 0.54
LSM6-207ENST00000515311 IL5RAQ01344 420 aa18.43■□□□□ 0.54
LSM6-207ENST00000515311 ETFDHQ16134 617 aa18.43■□□□□ 0.54
LSM6-207ENST00000515311 OCLNQ16625 522 aa18.43■□□□□ 0.54
LSM6-207ENST00000515311 SLC35D3Q5M8T2 416 aa18.43■□□□□ 0.54
LSM6-207ENST00000515311 MEDAGQ5VYS4 303 aa18.43■□□□□ 0.54
LSM6-207ENST00000515311 OR7E24Q6IFN5 339 aa18.43■□□□□ 0.54
LSM6-207ENST00000515311 ANKRD16Q6P6B7 361 aa18.43■□□□□ 0.54
LSM6-207ENST00000515311 OR1K1Q8NGR3 316 aa18.43■□□□□ 0.54
LSM6-207ENST00000515311 RNASE6Q93091 150 aaKnown RBP18.43■□□□□ 0.54
LSM6-207ENST00000515311 KISS1RQ969F8 398 aaPredicted RBP18.43■□□□□ 0.54
LSM6-207ENST00000515311 RASSF1Q9NS23 344 aa18.43■□□□□ 0.54
LSM6-207ENST00000515311 COA3Q9Y2R0 106 aaPredicted RBP18.43■□□□□ 0.54
LSM6-207ENST00000515311 NKX2-6A6NCS4 301 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 LYZL6O75951 148 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 GYPBP06028 91 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 NPR2P20594 1047 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 LAP3P28838 519 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 PYCR1P32322 319 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 GUCA1AP43080 201 aaPredicted RBP18.42■□□□□ 0.54
LSM6-207ENST00000515311 SRSF1Q07955 248 aaKnown RBP eCLIP18.42■□□□□ 0.54
LSM6-207ENST00000515311 MAD2L1BPQ15013 274 aaPredicted RBP18.42■□□□□ 0.54
LSM6-207ENST00000515311 C9orf135Q5VTT2 229 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 BHLHA15Q7RTS1 189 aaPredicted RBP18.42■□□□□ 0.54
LSM6-207ENST00000515311 C17orf78Q8N4C9 275 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 BBS1Q8NFJ9 593 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 SLC26A10Q8NG04 563 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 RFKQ969G6 155 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 Q96MT0 163 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 USB1Q9BQ65 265 aaKnown RBP18.42■□□□□ 0.54
LSM6-207ENST00000515311 OR10A4Q9H209 315 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 OR51V1Q9H2C8 321 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 NELFAQ9H3P2 528 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 HCFC1P51610 2035 aa18.42■□□□□ 0.54
LSM6-207ENST00000515311 A0A1W2PPL8 197 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 CIB4A0PJX0 185 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 GLCEO94923 617 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 HRGP04196 525 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 GAAP10253 952 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 MYF6P23409 242 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 CDAP32320 146 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 UGT2B10P36537 528 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 TEKQ02763 1124 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 TFF3Q07654 80 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 FAM27E3Q08E93 113 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 DBPQ10586 325 aaPredicted RBP18.41■□□□□ 0.54
LSM6-207ENST00000515311 APOFQ13790 326 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 GABRA6Q16445 453 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 KCNMB1Q16558 191 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 C1QTNF12Q5T7M4 302 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 LINC01590Q5TEZ4 76 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 ZNF813Q6ZN06 617 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 MEPCEQ7L2J0 689 aaKnown RBP18.41■□□□□ 0.54
LSM6-207ENST00000515311 STEAP2Q8NFT2 490 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 FBLIM1Q8WUP2 373 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 ZNRF4Q8WWF5 429 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 BCL2L2Q92843 193 aaPredicted RBP18.41■□□□□ 0.54
LSM6-207ENST00000515311 NABP1Q96AH0 204 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 ZNF582Q96NG8 517 aaPredicted RBP18.41■□□□□ 0.54
LSM6-207ENST00000515311 Q9H521 79 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 SEC61A2Q9H9S3 476 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 SIAEQ9HAT2 523 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 POLE4Q9NR33 117 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 CLN6Q9NWW5 311 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 DNAJC27Q9NZQ0 273 aa18.41■□□□□ 0.54
LSM6-207ENST00000515311 H2AFY2Q9P0M6 372 aaPredicted RBP18.41■□□□□ 0.54
LSM6-207ENST00000515311 SLC22A31A6NKX4 558 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 C16orf97H3BN30 126 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 RAD51DO75771 328 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 OR8G3PP0DMU2 310 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 B4GALT1P15291 398 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 MSR1P21757 451 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 IL32P24001 234 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 FMO3P31513 532 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 SORDQ00796 357 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 HSF2Q03933 536 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 TMED1Q13445 227 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 KLHL12Q53G59 568 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 LCN1P1Q5VSP4 162 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 FAM27BQ5VT28 67 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 BCDIN3DQ7Z5W3 292 aaKnown RBP18.4■□□□□ 0.54
LSM6-207ENST00000515311 THAP5Q7Z6K1 395 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 P2RY8Q86VZ1 359 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 SLC22A24Q8N4F4 322 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 OR51L1Q8NGJ5 315 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 OR6K6Q8NGW6 343 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 SSC4DQ8WTU2 575 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 APH1BQ8WW43 257 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 TEAD3Q99594 435 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 HELZ2Q9BYK8 2649 aaKnown RBP18.4■□□□□ 0.54
LSM6-207ENST00000515311 SPTBN1Q01082 2364 aaKnown RBP18.4■□□□□ 0.54
LSM6-207ENST00000515311 TENM4Q6N022 2769 aa18.4■□□□□ 0.54
LSM6-207ENST00000515311 CCDC182A6NF36 153 aa18.39■□□□□ 0.53
LSM6-207ENST00000515311 SNTNA6NMZ2 147 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms