RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SYNGR3O43761 229 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 CCL2P13500 99 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 RHCEP18577 417 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 RAP1BP61224 184 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 RAP1AP62834 184 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 HSF2Q03933 536 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 FHL1Q13642 323 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 GGTLC2Q14390 218 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 TBC1D28Q2M2D7 210 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 PODNL1Q6PEZ8 512 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 SLC25A47Q6Q0C1 308 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 PIGWQ7Z7B1 504 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 PGAM4Q8N0Y7 254 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 CLDN22Q8N7P3 220 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 OR1J2Q8NGS2 313 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 FOXN4Q96NZ1 517 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 NDEL1Q9GZM8 345 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 LRMDAQ9H2I8 198 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 GORASP2Q9H8Y8 452 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 FZR1Q9UM11 496 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 V9GYQ6 96 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 ABCA1O95477 2261 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 A0A1W2PRQ8 180 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 VWC2LB2RUY7 222 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 M0R233 179 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 CDC42EP2O14613 210 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 CRLF1O75462 422 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 MMP7P09237 267 aaPredicted RBP21.08■□□□□ 0.97
SNF8-213ENST00000514929 FAM157BP0CG42 384 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 DAOP14920 347 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 GUCA1AP43080 201 aaPredicted RBP21.08■□□□□ 0.97
SNF8-213ENST00000514929 NR4A2P43354 598 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 ERVK-25P63136 954 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 VLDLRP98155 873 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 DGCR6Q14129 220 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 KRT72Q14CN4 511 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 ZBED5Q49AG3 693 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 SAMD4BQ5PRF9 694 aaKnown RBP21.08■□□□□ 0.97
SNF8-213ENST00000514929 PAQR4Q8N4S7 273 aaPredicted RBP21.08■□□□□ 0.97
SNF8-213ENST00000514929 FAM86B1Q8N7N1 296 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 ZNF519Q8TB69 540 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 NABP1Q96AH0 204 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 FAM46AQ96IP4 442 aaKnown RBP21.08■□□□□ 0.97
SNF8-213ENST00000514929 C7orf34Q96L11 122 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 TPK1Q9H3S4 243 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 ARL8BQ9NVJ2 186 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 REV1Q9UBZ9 1251 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 DUSP13Q9UII6 198 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 MAGEL2Q9UJ55 1249 aa21.08■□□□□ 0.97
SNF8-213ENST00000514929 A8MV72 311 aaPredicted RBP21.07■□□□□ 0.96
SNF8-213ENST00000514929 DIRAS1O95057 198 aa21.07■□□□□ 0.96
SNF8-213ENST00000514929 HSD17B1P14061 328 aa21.07■□□□□ 0.96
SNF8-213ENST00000514929 APLNRP35414 380 aa21.07■□□□□ 0.96
SNF8-213ENST00000514929 MXRA7P84157 204 aa21.07■□□□□ 0.96
SNF8-213ENST00000514929 PABPC1L2AQ5JQF8 200 aa21.07■□□□□ 0.96
SNF8-213ENST00000514929 LRP11Q86VZ4 500 aa21.07■□□□□ 0.96
SNF8-213ENST00000514929 ARIH2OSQ8N7S6 290 aa21.07■□□□□ 0.96
SNF8-213ENST00000514929 ZNF540Q8NDQ6 660 aa21.07■□□□□ 0.96
SNF8-213ENST00000514929 CDRT15Q96T59 188 aa21.07■□□□□ 0.96
SNF8-213ENST00000514929 OR51B6Q9H340 312 aa21.07■□□□□ 0.96
SNF8-213ENST00000514929 MS4A5Q9H3V2 200 aa21.07■□□□□ 0.96
SNF8-213ENST00000514929 GRHPRQ9UBQ7 328 aa21.07■□□□□ 0.96
SNF8-213ENST00000514929 SNAP29O95721 258 aa21.06■□□□□ 0.96
SNF8-213ENST00000514929 CD14P08571 375 aa21.06■□□□□ 0.96
SNF8-213ENST00000514929 IGFBP1P08833 259 aaPredicted RBP21.06■□□□□ 0.96
SNF8-213ENST00000514929 ZNF32P17041 273 aa21.06■□□□□ 0.96
SNF8-213ENST00000514929 ITGA2P17301 1181 aa21.06■□□□□ 0.96
SNF8-213ENST00000514929 APEX1P27695 318 aaKnown RBP21.06■□□□□ 0.96
SNF8-213ENST00000514929 MSX2P35548 267 aaPredicted RBP21.06■□□□□ 0.96
SNF8-213ENST00000514929 IQCCQ4KMZ1 466 aa21.06■□□□□ 0.96
SNF8-213ENST00000514929 C6orf52Q5T4I8 152 aa21.06■□□□□ 0.96
SNF8-213ENST00000514929 RGS7BPQ6MZT1 257 aaPredicted RBP21.06■□□□□ 0.96
SNF8-213ENST00000514929 PYURFQ96I23 114 aa21.06■□□□□ 0.96
SNF8-213ENST00000514929 KRCC1Q9NPI7 259 aaPredicted RBP21.06■□□□□ 0.96
SNF8-213ENST00000514929 NDE1Q9NXR1 346 aa21.06■□□□□ 0.96
SNF8-213ENST00000514929 ADAM18Q9Y3Q7 739 aa21.06■□□□□ 0.96
SNF8-213ENST00000514929 A0A1W2PPL8 197 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 A0A1W2PPW3 197 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 H7C1C5 153 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 XKRYO14609 159 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 STAMBPO95630 424 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 LCKP06239 509 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 ALDH3B1P43353 468 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 SELENOVP59797 346 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 LCN6P62502 163 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 FAM27BQ5VT28 67 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 CYB5R2Q6BCY4 276 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 C16orf89Q6UX73 402 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 UBASH3BQ8TF42 649 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 Q96M85 177 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 NSMCE2Q96MF7 247 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 BPESC1Q9GZL8 116 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 ADAM21Q9UKJ8 722 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 AURKCQ9UQB9 309 aa21.05■□□□□ 0.96
SNF8-213ENST00000514929 TRBV4-1A0A0J9YWV2 114 aa21.04■□□□□ 0.96
SNF8-213ENST00000514929 NDUFB2O95178 105 aa21.04■□□□□ 0.96
SNF8-213ENST00000514929 CCNOP22674 350 aa21.04■□□□□ 0.96
SNF8-213ENST00000514929 LAP3P28838 519 aa21.04■□□□□ 0.96
SNF8-213ENST00000514929 RAD52P43351 418 aa21.04■□□□□ 0.96
SNF8-213ENST00000514929 UCP2P55851 309 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms