RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 CTGFP29279 349 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 STARD6P59095 220 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 AKR1C1Q04828 323 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 LRRC37A5PQ49AS3 106 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 GDF7Q7Z4P5 450 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ZDHHC23Q8IYP9 409 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 EDARADDQ8WWZ3 215 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 APOBEC3DQ96AK3 386 aaPredicted RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 LGALS12Q96DT0 336 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 AP1S3Q96PC3 154 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 COA3Q9Y2R0 106 aaPredicted RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 MAB21L2Q9Y586 359 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TMEM72A0PK05 275 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 PTPN6P29350 595 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 PIGAP37287 484 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 HBG1P69891 147 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 HBG2P69892 147 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 BTG2P78543 158 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ERHP84090 104 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 LTBQ06643 244 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 CSRP2Q16527 193 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ACSM5Q6NUN0 579 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 METAP1DQ6UB28 335 aaPredicted RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 OR8H3Q8N146 312 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 OR5M1Q8NGP8 315 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 CMTM2Q8TAZ6 248 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ZNF251Q9BRH9 671 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 LUZP4Q9P127 313 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TRGV10A0A0A0MS01 117 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 SMIM30A4D0T7 59 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TUBAL3A6NHL2 446 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TFPTP0C1Z6 253 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 EDN3P14138 238 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 PRKACAP17612 351 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 HTR2CP28335 458 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 BRS3P32247 399 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 MFGE8Q08431 387 aaPredicted RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 COL9A2Q14055 689 aaPredicted RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 GLYR1Q49A26 553 aaPredicted RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 WIPI1Q5MNZ9 446 aaPredicted RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 TMEM236Q5W0B7 351 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 KCNIP4Q6PIL6 250 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 DCXRQ7Z4W1 244 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 Q8IYB0 196 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ARIH2OSQ8N7S6 290 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 OR14K1Q8NGZ2 314 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 OR52N5Q8NH56 324 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 C16orf52Q8NHV5 167 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 HSD17B8Q92506 261 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TFAP2CQ92754 450 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 KCTD12Q96CX2 325 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 TSNAXQ99598 290 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 EIF5A2Q9GZV4 153 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 HEYLQ9NQ87 328 aaPredicted RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 UFSP2Q9NUQ7 469 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TCFL5Q9UL49 500 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 PHIPQ8WWQ0 1821 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TRBV5-4A0A0C4DH59 114 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 A0A1W2PNR3 127 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 M0R233 179 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 P2RY10O00398 339 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 MSTNO14793 375 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 LRP3O75074 770 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 COL9A1P20849 921 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 BCKDHBP21953 392 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 BMP5P22003 454 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 LIPAP38571 399 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 ALDH3B2P48448 385 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 PGGT1BP53609 377 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 SRSF5Q13243 272 aaKnown RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 UGT8Q16880 541 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 TRMT12Q53H54 448 aaKnown RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 PLA1AQ53H76 456 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 TRNP1Q6NT89 227 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 LILRA3Q8N6C8 439 aaPredicted RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 SLC16A11Q8NCK7 471 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 OR6M1Q8NGM8 313 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 OR2A1Q8NGT9 310 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 OR13G1Q8NGZ3 307 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 ZNF419Q96HQ0 510 aaPredicted RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 C7orf34Q96L11 122 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 BIRC8Q96P09 236 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 SLC26A1Q9H2B4 701 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 UBTD1Q9HAC8 227 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 NECAP2Q9NVZ3 263 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 PTTG3PQ9NZH4 202 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 OR5V1Q9UGF6 321 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 ZNF391Q9UJN7 358 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 PPIL1Q9Y3C6 166 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 PCDHGA7Q9Y5G6 932 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 KCNMB2Q9Y691 235 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 NUP98P52948 1817 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 M0R135 149 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 TAPBPO15533 448 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 ICOSLGO75144 302 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 CTSLP07711 333 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 F2RP25116 425 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 RAP2BP61225 183 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 FOXK2Q01167 660 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 MC2RQ01718 297 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms