RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 UBIAD1Q9Y5Z9 338 aa3.6□□□□□ -1.83
LINC01088-208ENST00000511895 USF3Q68DE3 2245 aa3.6□□□□□ -1.83
LINC01088-208ENST00000511895 NCOA6Q14686 2063 aaPredicted RBP3.59□□□□□ -1.83
LINC01088-208ENST00000511895 PSMB11A5LHX3 300 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 CASC3O15234 703 aaKnown RBP3.59□□□□□ -1.83
LINC01088-208ENST00000511895 RNF113AO15541 343 aaKnown RBP3.59□□□□□ -1.83
LINC01088-208ENST00000511895 NPIPB7O75200 414 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 INSP01308 110 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 CALCBP10092 127 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 COX7A1P24310 79 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 CCNCP24863 283 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 CD80P33681 288 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 NUDT1P36639 197 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 KRTAP10-8P60410 259 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 EWSR1Q01844 656 aaKnown RBP eCLIP3.59□□□□□ -1.83
LINC01088-208ENST00000511895 ZNF235Q14590 738 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 INAQ16352 499 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 AGBL2Q5U5Z8 902 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 CCDC137Q6PK04 289 aaKnown RBP3.59□□□□□ -1.83
LINC01088-208ENST00000511895 XKRXQ6PP77 449 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 KIAA1328Q86T90 577 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 ARIH2OSQ8N7S6 290 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 MRPS31Q92665 395 aaKnown RBP3.59□□□□□ -1.83
LINC01088-208ENST00000511895 PGLYRP4Q96LB8 373 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 GAL3ST1Q99999 423 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 MRPL13Q9BYD1 178 aaKnown RBP3.59□□□□□ -1.83
LINC01088-208ENST00000511895 NAT10Q9H0A0 1025 aaKnown RBP3.59□□□□□ -1.83
LINC01088-208ENST00000511895 SYNDIG1Q9H7V2 258 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 LRTM1Q9HBL6 345 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 MRPL40Q9NQ50 206 aaKnown RBP3.59□□□□□ -1.83
LINC01088-208ENST00000511895 TREM2Q9NZC2 230 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 ACTR3BQ9P1U1 418 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 DEC1Q9P2X7 70 aa3.59□□□□□ -1.83
LINC01088-208ENST00000511895 CMYA5Q8N3K9 4069 aa3.59□□□□□ -1.84
LINC01088-208ENST00000511895 COL7A1Q02388 2944 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 IGLV3-16A0A075B6K0 115 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 A0A087WZY1 265 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 TRAV19A0A0A6YYK7 116 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 GSAPA4D1B5 854 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 D6RAR5 112 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 E7ESA3 106 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 SLC9A3R1O14745 358 aaPredicted RBP3.58□□□□□ -1.84
LINC01088-208ENST00000511895 ZBTB5O15062 677 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 MAGEB4O15481 346 aaPredicted RBP3.58□□□□□ -1.84
LINC01088-208ENST00000511895 TRAF3IP2O43734 574 aaPredicted RBP3.58□□□□□ -1.84
LINC01088-208ENST00000511895 RAD1O60671 282 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 CCNE2O96020 404 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 CA1P00915 261 aaPredicted RBP3.58□□□□□ -1.84
LINC01088-208ENST00000511895 CTRLP40313 264 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 PRPS1P60891 318 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 LRRC63Q05C16 580 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 SCGB2A2Q13296 93 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 ITGB3BPQ13352 177 aaPredicted RBP3.58□□□□□ -1.84
LINC01088-208ENST00000511895 WDR43Q15061 677 aaKnown RBP eCLIP3.58□□□□□ -1.84
LINC01088-208ENST00000511895 RABGAP1LQ5R372 815 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 KHDRBS2Q5VWX1 349 aaKnown RBP3.58□□□□□ -1.84
LINC01088-208ENST00000511895 CENPPQ6IPU0 288 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 IGFL3Q6UXB1 125 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 TPRA1Q86W33 373 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 DENND6BQ8NEG7 585 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 TCTEX1D2Q8WW35 142 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 RAPGEF5Q92565 580 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 UCN3Q969E3 161 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 NXF5Q9H1B4 397 aaKnown RBP3.58□□□□□ -1.84
LINC01088-208ENST00000511895 LHX5Q9H2C1 402 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 PLGRKTQ9HBL7 147 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 SGK2Q9HBY8 427 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 AGPAT4Q9NRZ5 378 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 PRPF19Q9UMS4 504 aaKnown RBP3.58□□□□□ -1.84
LINC01088-208ENST00000511895 HRNRQ86YZ3 2850 aaPredicted RBP3.58□□□□□ -1.84
LINC01088-208ENST00000511895 ANAPC1Q9H1A4 1944 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 ARID1AO14497 2285 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 ROS1P08922 2347 aa3.58□□□□□ -1.84
LINC01088-208ENST00000511895 IGHV2-70DA0A0C4DH43 119 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 A6NDX4 124 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 MSH4O15457 936 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 ZNF780AO75290 641 aaPredicted RBP3.57□□□□□ -1.84
LINC01088-208ENST00000511895 ERLIN2O94905 339 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 ATF6P18850 670 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 PRDX3P30048 256 aaKnown RBP3.57□□□□□ -1.84
LINC01088-208ENST00000511895 RPS10P46783 165 aaKnown RBP3.57□□□□□ -1.84
LINC01088-208ENST00000511895 GTF3C1Q12789 2109 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 UNC119Q13432 240 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 ARL6IP1Q15041 203 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 DEFB113Q30KQ7 82 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 CENPLQ8N0S6 344 aaPredicted RBP3.57□□□□□ -1.84
LINC01088-208ENST00000511895 FAM71E2Q8N5Q1 922 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 Q8N9W7 124 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 CCDC110Q8TBZ0 833 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 SCFD1Q8WVM8 642 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 RPL3LQ92901 407 aaKnown RBP3.57□□□□□ -1.84
LINC01088-208ENST00000511895 NAT6Q93015 286 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 KLHDC3Q9BQ90 382 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 SPATA16Q9BXB7 569 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 AIG1Q9NVV5 245 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 ZNF225Q9UK10 706 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 ZNF223Q9UK11 482 aaPredicted RBP3.57□□□□□ -1.84
LINC01088-208ENST00000511895 STAB2Q8WWQ8 2551 aa3.57□□□□□ -1.84
LINC01088-208ENST00000511895 ABCA1O95477 2261 aa3.56□□□□□ -1.84
LINC01088-208ENST00000511895 TRIP11Q15643 1979 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms