RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 CXXC4Q9H2H0 198 aa8.6□□□□□ -1.03
NR1I3-220ENST00000505005 OR52D1Q9H346 318 aa8.6□□□□□ -1.03
NR1I3-220ENST00000505005 MYOZ1Q9NP98 299 aaPredicted RBP8.6□□□□□ -1.03
NR1I3-220ENST00000505005 CBLN4Q9NTU7 201 aa8.6□□□□□ -1.03
NR1I3-220ENST00000505005 ARMC1Q9NVT9 282 aa8.6□□□□□ -1.03
NR1I3-220ENST00000505005 B3GNT2Q9NY97 397 aa8.6□□□□□ -1.03
NR1I3-220ENST00000505005 VSX1Q9NZR4 365 aaPredicted RBP8.6□□□□□ -1.03
NR1I3-220ENST00000505005 GMPR2Q9P2T1 348 aaKnown RBP8.6□□□□□ -1.03
NR1I3-220ENST00000505005 ATPIF1Q9UII2 106 aa8.6□□□□□ -1.03
NR1I3-220ENST00000505005 ATP23Q9Y6H3 246 aa8.6□□□□□ -1.03
NR1I3-220ENST00000505005 CDH10Q9Y6N8 788 aa8.6□□□□□ -1.03
NR1I3-220ENST00000505005 ITPR2Q14571 2701 aa8.6□□□□□ -1.03
NR1I3-220ENST00000505005 DSCAMO60469 2012 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 NAV2Q8IVL1 2488 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 ANKRD17O75179 2603 aaKnown RBP8.59□□□□□ -1.03
NR1I3-220ENST00000505005 A0A096LPE4 126 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 TEX13CA0A0J9YWL9 993 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 A0A1W2PPZ6 126 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 H3BSA7 217 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 J3QW42 95 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 CDC42EP2O14613 210 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 PIP5K1CO60331 668 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 DIRAS1O95057 198 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 SNAP29O95721 258 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 HMGN1P05114 100 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 CSF3P09919 207 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 FOSL1P15407 271 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 CD53P19397 219 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 PAICSP22234 425 aaKnown RBP8.59□□□□□ -1.03
NR1I3-220ENST00000505005 EDNRAP25101 427 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 LAP3P28838 519 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 PCSK6P29122 969 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 TTKP33981 857 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 LIPAP38571 399 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 FABP6P51161 128 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 ART1P52961 327 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 SNRPD2P62316 118 aaKnown RBP8.59□□□□□ -1.03
NR1I3-220ENST00000505005 NAAAQ02083 359 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 HSF2Q03933 536 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 TOP3AQ13472 1001 aaPredicted RBP8.59□□□□□ -1.03
NR1I3-220ENST00000505005 KRR1Q13601 381 aaKnown RBP8.59□□□□□ -1.03
NR1I3-220ENST00000505005 SNCBQ16143 134 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 SLC25A47Q6Q0C1 308 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 FAM122BQ7Z309 247 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 TSEN54Q7Z6J9 526 aaKnown RBP8.59□□□□□ -1.03
NR1I3-220ENST00000505005 DTX2Q86UW9 622 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 GLB1L2Q8IW92 636 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 MUC15Q8N387 334 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 SVOPLQ8N434 492 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 FAM86B1Q8N7N1 296 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 SYT14Q8NB59 555 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 OR13C2Q8NGS9 318 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 ZNF519Q8TB69 540 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 TEX47Q8TBZ9 253 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 CANT1Q8WVQ1 401 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 ERMAPQ96PL5 475 aaPredicted RBP8.59□□□□□ -1.03
NR1I3-220ENST00000505005 DCLRE1CQ96SD1 692 aaKnown RBP8.59□□□□□ -1.03
NR1I3-220ENST00000505005 SEC61A2Q9H9S3 476 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 ELOVL3Q9HB03 270 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 CDH20Q9HBT6 801 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 CMAHPQ9Y471 501 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 FKBP7Q9Y680 259 aa8.59□□□□□ -1.03
NR1I3-220ENST00000505005 APCP25054 2843 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 ALPK2Q86TB3 2170 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 SHISA9B4DS77 424 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 B4GALT1P15291 398 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 PTNP21246 168 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 LOXP28300 417 aaPredicted RBP8.58□□□□□ -1.04
NR1I3-220ENST00000505005 GLRXP35754 106 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 ERVK-25P63136 954 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 ECH1Q13011 328 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 AQP6Q13520 282 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 CCNIQ14094 377 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 DAG1Q14118 895 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 RAB35Q15286 201 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 SGCAQ16586 387 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 TUSC1Q2TAM9 212 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 PGBD2Q6P3X8 592 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 ZNF620Q6ZNG0 422 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 FOXL2NBQ6ZUU3 175 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 C22orf34Q6ZV56 151 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 ZDHHC13Q8IUH4 622 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 ADGRG5Q8IZF4 528 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 AQP11Q8NBQ7 271 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 GJC3Q8NFK1 279 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 OR10H5Q8NGA6 315 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 OR10G2Q8NGC3 310 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 OR4C15Q8NGM1 316 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 OR2T4Q8NH00 348 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 HDAC2Q92769 488 aaKnown RBP8.58□□□□□ -1.04
NR1I3-220ENST00000505005 TSPAN32Q96QS1 320 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 CDADC1Q9BWV3 514 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 RACGAP1Q9H0H5 632 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 MS4A5Q9H3V2 200 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 ZNF701Q9NV72 531 aaPredicted RBP8.58□□□□□ -1.04
NR1I3-220ENST00000505005 KIF17Q9P2E2 1029 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 CGGBP1Q9UFW8 167 aaPredicted RBP8.58□□□□□ -1.04
NR1I3-220ENST00000505005 MOKQ9UQ07 419 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 PLEKHA6Q9Y2H5 1048 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 AP4S1Q9Y587 144 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms