RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 SLC25A47Q6Q0C1 308 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 CBLL1Q75N03 491 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 RRM2BQ7LG56 351 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 VTCN1Q7Z7D3 282 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 OAFQ86UD1 273 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 OR51A7Q8NH64 312 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 ZNF519Q8TB69 540 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 SYNPRQ8TBG9 265 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 GEMIN6Q8WXD5 167 aaKnown RBP10.94□□□□□ -0.66
PTPRF-214ENST00000496043 TMEM158Q8WZ71 300 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 NSMAFQ92636 917 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 ALG12Q9BV10 488 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 BCL2L14Q9BZR8 327 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 CHODLQ9H9P2 273 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 SLCO1C1Q9NYB5 712 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 TAAR3PQ9P1P4 343 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 MYEF2Q9P2K5 600 aaKnown RBP10.94□□□□□ -0.66
PTPRF-214ENST00000496043 GMPR2Q9P2T1 348 aaKnown RBP10.94□□□□□ -0.66
PTPRF-214ENST00000496043 RHCGQ9UBD6 479 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 SNX13Q9Y5W8 968 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 EFCAB9A8MZ26 197 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 J3KTA2 159 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 SLC2A10O95528 541 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 CLPTM1O96005 669 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 HPXP02790 462 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 MMP7P09237 267 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-214ENST00000496043 NAT2P11245 290 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 ZNF250P15622 560 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 HNF1AP20823 631 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 IGFBP5P24593 272 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 APEX1P27695 318 aaKnown RBP10.93□□□□□ -0.66
PTPRF-214ENST00000496043 THBS2P35442 1172 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 SLC7A2P52569 658 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 TMEM33P57088 247 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 TOP3AQ13472 1001 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-214ENST00000496043 NKPD1Q17RQ9 610 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 PABPC1L2AQ5JQF8 200 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 ELFN2Q5R3F8 820 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 FAM120AOSQ5T036 256 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 FAM27BQ5VT28 67 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 FAM205BPQ63HN1 556 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 HACD2Q6Y1H2 254 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 ZNF730Q6ZMV8 503 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 CYP4Z1Q86W10 505 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 NRMQ8IXM6 262 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 OFCC1Q8IZS5 231 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 PAQR4Q8N4S7 273 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-214ENST00000496043 LINC01356Q8N9X3 169 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 ACOT11Q8WXI4 607 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-214ENST00000496043 NMD3Q96D46 503 aaKnown RBP10.93□□□□□ -0.66
PTPRF-214ENST00000496043 CMTM5Q96DZ9 223 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 EIF3KQ9UBQ5 218 aaKnown RBP10.93□□□□□ -0.66
PTPRF-214ENST00000496043 UGT2A1Q9Y4X1 527 aa10.93□□□□□ -0.66
PTPRF-214ENST00000496043 RTTNQ86VV8 2226 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 A0A087WUU8 490 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 IGKV1D-43A0A0B4J1Z2 117 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 A6NIZ1 184 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 NME4O00746 187 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 FFAR1O14842 300 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 ATP8B1O43520 1251 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 SERPINA1P01009 418 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 IGHMP01871 453 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 ZNF32P17041 273 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 SRD5A1P18405 259 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 ACHEP22303 614 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 CCNOP22674 350 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 STOMP27105 288 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 GPR6P46095 362 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-214ENST00000496043 SLC9A3P48764 834 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 GSK3BP49841 420 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 KLF3P57682 345 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-214ENST00000496043 RAP1BP61224 184 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 PCBD1P61457 104 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 RAP1AP62834 184 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 MRPS11P82912 194 aaKnown RBP10.92□□□□□ -0.66
PTPRF-214ENST00000496043 FMODQ06828 376 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 C8orf82Q6P1X6 216 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-214ENST00000496043 TMEM154Q6P9G4 183 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 TBPL2Q6SJ96 375 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 UNQ6126/PRO20091Q6UXV3 157 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 MBOAT2Q6ZWT7 520 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 TREML1Q86YW5 311 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 ALDH16A1Q8IZ83 802 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 LRRC75AQ8NAA5 344 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 ICA1LQ8NDH6 482 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 CPEB3Q8NE35 698 aaKnown RBP10.92□□□□□ -0.66
PTPRF-214ENST00000496043 SNX33Q8WV41 574 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 FAM162AQ96A26 154 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 NABP1Q96AH0 204 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 SNX18Q96RF0 628 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 KCTD14Q9BQ13 255 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-214ENST00000496043 ELAC2Q9BQ52 826 aaKnown RBP10.92□□□□□ -0.66
PTPRF-214ENST00000496043 SOX7Q9BT81 388 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 OR51B6Q9H340 312 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 HINT3Q9NQE9 182 aaKnown RBP10.92□□□□□ -0.66
PTPRF-214ENST00000496043 MAN2C1Q9NTJ4 1040 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 FAM32AQ9Y421 112 aaKnown RBP10.92□□□□□ -0.66
PTPRF-214ENST00000496043 TIMM10BQ9Y5J6 103 aa10.92□□□□□ -0.66
PTPRF-214ENST00000496043 IGLV3-9A0A075B6K5 115 aa10.91□□□□□ -0.66
PTPRF-214ENST00000496043 TRAV27A0A087WT01 109 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms