RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 IGFBP3P17936 291 aaPredicted RBP2.36□□□□□ -2.03
CD46-216ENST00000490278 NSG1P42857 185 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 FAM83EQ2M2I3 478 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 ANKRD22Q5VYY1 191 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 ANKRD26P1Q6NSI1 321 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 TEX43Q6ZNM6 134 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 FAM92BQ6ZTR7 304 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 HDDC2Q7Z4H3 204 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 OR56B2PQ8NGI1 322 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 OR4S2Q8NH73 311 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 RASD2Q96D21 266 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 CCDC126Q96EE4 140 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 OR2A5Q96R48 311 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 ATP5SQ99766 215 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 LSM7Q9UK45 103 aaKnown RBP2.36□□□□□ -2.03
CD46-216ENST00000490278 MROH7-TTC4A0A0A0MT08 1334 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 LRP4O75096 1905 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 IGLV4-60A0A075B6I1 120 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 IGHV3-74A0A0B4J1X5 117 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 IGHV5-51A0A0C4DH38 117 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 ENTPD5O75356 428 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 WISP3O95389 354 aaPredicted RBP2.35□□□□□ -2.03
CD46-216ENST00000490278 RAB3DO95716 219 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 RETP07949 1114 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 GNAO1P09471 354 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 CDKN2BP42772 138 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 TNNT2P45379 298 aaPredicted RBP2.35□□□□□ -2.03
CD46-216ENST00000490278 ACLYP53396 1101 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 TWF1Q12792 350 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 ERCC8Q13216 396 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 EIF4EBP1Q13541 118 aaPredicted RBP2.35□□□□□ -2.03
CD46-216ENST00000490278 GINS1Q14691 196 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 ZSCAN26Q16670 478 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 CCNJQ5T5M9 372 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 FAM71E1Q6IPT2 247 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 DUX4L9Q6RFH8 374 aaPredicted RBP2.35□□□□□ -2.03
CD46-216ENST00000490278 SASS6Q6UVJ0 657 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 Q6ZSR3 168 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 CDH26Q8IXH8 852 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 H1FOOQ8IZA3 346 aaPredicted RBP2.35□□□□□ -2.03
CD46-216ENST00000490278 OR2L8Q8NGY9 312 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 N4BP2L2Q92802 583 aaPredicted RBP2.35□□□□□ -2.03
CD46-216ENST00000490278 CREB3L1Q96BA8 519 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 PKNOX2Q96KN3 472 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 PLIN2Q99541 437 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 CENPKQ9BS16 269 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 CHAC1Q9BUX1 264 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 RPP21Q9H633 154 aaKnown RBP2.35□□□□□ -2.03
CD46-216ENST00000490278 FGF20Q9NP95 211 aaPredicted RBP2.35□□□□□ -2.03
CD46-216ENST00000490278 ISYNA1Q9NPH2 558 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 NECAP2Q9NVZ3 263 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 PSG8Q9UQ74 426 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 GOLT1BQ9Y3E0 138 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 USP47Q96K76 1375 aa2.35□□□□□ -2.03
CD46-216ENST00000490278 ZNF816-ZNF321PA0A0X1KG74 233 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 GOLGA8OA6NCC3 632 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 LRRIQ3A6PVS8 624 aaPredicted RBP2.34□□□□□ -2.03
CD46-216ENST00000490278 SPECC1L-ADORA2AF8WAN1 911 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 GOLGA8NF8WBI6 632 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 RAB29O14966 203 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 GABARAPO95166 117 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 CTDNEP1O95476 244 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 ZNF24P17028 368 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 PGAM1P18669 254 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 FOXN2P32314 431 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 AQP2P41181 271 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 NAA10P41227 235 aaPredicted RBP2.34□□□□□ -2.03
CD46-216ENST00000490278 NAMPTP43490 491 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 TMED10P49755 219 aaKnown RBP2.34□□□□□ -2.03
CD46-216ENST00000490278 XKR7Q5GH72 579 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 SPECC1LQ69YQ0 1117 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 SLC8B1Q6J4K2 584 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 ZYG11AQ6WRX3 759 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 NCCRP1Q6ZVX7 275 aaPredicted RBP2.34□□□□□ -2.03
CD46-216ENST00000490278 PGAM4Q8N0Y7 254 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 C15orf56Q8N910 161 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 FBXL13Q8NEE6 735 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 OR5W2Q8NH69 310 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 ZNF502Q8TBZ5 544 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 SLC7A13Q8TCU3 470 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 KIFAP3Q92845 792 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 SERPINB12Q96P63 405 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 NDFIP1Q9BT67 221 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 NUP58Q9BVL2 599 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 RACGAP1Q9H0H5 632 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 PARP12Q9H0J9 701 aaKnown RBP2.34□□□□□ -2.03
CD46-216ENST00000490278 KCNJ16Q9NPI9 418 aa2.34□□□□□ -2.03
CD46-216ENST00000490278 PIKFYVEQ9Y2I7 2098 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 GLYATL1P3A0A0U1RQE8 302 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 A0A1B0GVX0 72 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 A0A1W2PP18 115 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 DPM1O60762 260 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 WBP4O75554 376 aaKnown RBP2.33□□□□□ -2.04
CD46-216ENST00000490278 CLPXO76031 633 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 SRP72O76094 671 aaKnown RBP2.33□□□□□ -2.04
CD46-216ENST00000490278 SLC25A14O95258 325 aaPredicted RBP2.33□□□□□ -2.04
CD46-216ENST00000490278 TSPAN13O95857 204 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 HLA-DPB1P04440 258 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 ANXA5P08758 320 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 ZNF250P15622 560 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms