RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TMEM185BQ9H7F4 350 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 MED29Q9NX70 200 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 ANKRD20A5PA0PJZ0 165 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 TPOP07202 933 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 ANOS1P23352 680 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 CD38P28907 300 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 PUDPQ08623 228 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 SPOCK1Q08629 439 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 EBPQ15125 230 aaKnown RBP11.42□□□□□ -0.58
CLIC4-202ENST00000488683 FAM69AQ5T7M9 428 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 KCTD20Q7Z5Y7 419 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 MEIOBQ8N635 442 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 OR51S1Q8NGJ8 323 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 OMA1Q96E52 524 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 ELMOD3Q96FG2 381 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 PTDSS2Q9BVG9 487 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 LAT2Q9GZY6 243 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 FSCN3Q9NQT6 498 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 MRPL39Q9NYK5 338 aaKnown RBP11.42□□□□□ -0.58
CLIC4-202ENST00000488683 PIPOXQ9P0Z9 390 aa11.42□□□□□ -0.58
CLIC4-202ENST00000488683 COA3Q9Y2R0 106 aaPredicted RBP11.42□□□□□ -0.58
CLIC4-202ENST00000488683 COL5A1P20908 1838 aaPredicted RBP11.41□□□□□ -0.58
CLIC4-202ENST00000488683 RHPN2P1A8MT19 583 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 H3BML4 177 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 SUSD5O60279 629 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 GDF9O60383 454 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 CRYZL1O95825 349 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 CD3DP04234 171 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 CALCBP10092 127 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 ABCD3P28288 659 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 LCN1P31025 176 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 ARL4DP49703 201 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 UBXN2BQ14CS0 331 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 C2orf76Q3KRA6 126 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 MOGAT2Q3SYC2 334 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 GKN2Q86XP6 184 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 ZNF417Q8TAU3 575 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 KLHL15Q96M94 604 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 ZNF587Q96SQ5 575 aaPredicted RBP11.41□□□□□ -0.58
CLIC4-202ENST00000488683 DPYSL5Q9BPU6 564 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 PELOQ9BRX2 385 aaKnown RBP11.41□□□□□ -0.58
CLIC4-202ENST00000488683 TAS2R4Q9NYW5 299 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 NPTNQ9Y639 398 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 TRBV5-7A0A0A0MS05 114 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 ZNF254O75437 659 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 SLC25A12O75746 678 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 OR6A2O95222 327 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 RENP00797 406 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 H2BFSP57053 126 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 FBXW4P57775 412 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 PSMA6P60900 246 aaKnown RBP11.41□□□□□ -0.58
CLIC4-202ENST00000488683 ZNF627Q7L945 461 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 C17orf82Q86X59 251 aaPredicted RBP11.41□□□□□ -0.58
CLIC4-202ENST00000488683 MSANTD3Q96H12 275 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 SORCS2Q96PQ0 1159 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 ACTR6Q9GZN1 396 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 ATG5Q9H1Y0 275 aa11.41□□□□□ -0.58
CLIC4-202ENST00000488683 XKRYO14609 159 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 CSF2RBP32927 897 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 EIF2B1Q14232 305 aaKnown RBP11.4□□□□□ -0.58
CLIC4-202ENST00000488683 RSPO4Q2I0M5 234 aaPredicted RBP11.4□□□□□ -0.58
CLIC4-202ENST00000488683 SLC22A6Q4U2R8 563 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 EMC4Q5J8M3 183 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 HLA-DQA1Q5Y7H0 255 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 LRFN4Q6PJG9 635 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 ALKAL2Q6UX46 152 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 SYT13Q7L8C5 426 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 TMPRSS9Q7Z410 1059 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 COMMD7Q86VX2 200 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 FAM46BQ96A09 425 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 CMBLQ96DG6 245 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 C4orf45Q96LM5 186 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 SPACA5Q96QH8 159 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 SLITRK2Q9H156 845 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 UCK1Q9HA47 277 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 ZNF230Q9UIE0 474 aaPredicted RBP11.4□□□□□ -0.58
CLIC4-202ENST00000488683 FBXO4Q9UKT5 387 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 EMC9Q9Y3B6 208 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 PRRC2CQ9Y520 2896 aaKnown RBP11.4□□□□□ -0.58
CLIC4-202ENST00000488683 EML6Q6ZMW3 1958 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 ARPC5O15511 151 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 TSPAN2O60636 221 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 CTAG2O75638 210 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 GLSO94925 669 aaPredicted RBP11.4□□□□□ -0.58
CLIC4-202ENST00000488683 ECDO95905 644 aaPredicted RBP11.4□□□□□ -0.58
CLIC4-202ENST00000488683 RAB40ALP0C0E4 278 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 GTF2F2P13984 249 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 MAPK3P27361 379 aaPredicted RBP11.4□□□□□ -0.58
CLIC4-202ENST00000488683 HOXD11P31277 338 aaPredicted RBP11.4□□□□□ -0.58
CLIC4-202ENST00000488683 ELFN2Q5R3F8 820 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 OLFML2AQ68BL7 652 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 ARSKQ6UWY0 536 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 ADGRG3Q86Y34 549 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 OTOSQ8NHW6 89 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 RAB40AQ8WXH6 277 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.4□□□□□ -0.58
CLIC4-202ENST00000488683 VN1R1Q9GZP7 353 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 COMMD4Q9H0A8 199 aa11.4□□□□□ -0.58
CLIC4-202ENST00000488683 NPDC1Q9NQX5 325 aaPredicted RBP11.4□□□□□ -0.58
CLIC4-202ENST00000488683 SCP2D1Q9UJQ7 156 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms