RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ZNF43P17038 809 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 CELP19835 753 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 GALP22466 123 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 SERPINB10P48595 397 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 AGFG1P52594 562 aaKnown RBP11.33□□□□□ -0.6
NELFE-209ENST00000488426 GFRA1P56159 465 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 RAC3P60763 192 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 RPS3AP61247 264 aaKnown RBP11.33□□□□□ -0.6
NELFE-209ENST00000488426 GLO1Q04760 184 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 CD200R1LQ6Q8B3 271 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 GPAT4Q86UL3 456 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 GGNQ86UU5 652 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 CDC20BQ86Y33 519 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 OR6X1Q8NH79 312 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 FNDC8Q8TC99 324 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 CPT1CQ8TCG5 803 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 HAVCR2Q8TDQ0 301 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 SMAP2Q8WU79 429 aaPredicted RBP11.33□□□□□ -0.6
NELFE-209ENST00000488426 SCMH1Q96GD3 660 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 TXNDC15Q96J42 360 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 ADAD1Q96M93 576 aaKnown RBP11.33□□□□□ -0.6
NELFE-209ENST00000488426 TTTY12Q9BZ98 90 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 RERGLQ9H628 205 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 WDR76Q9H967 626 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 SIAEQ9HAT2 523 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 EXOSC4Q9NPD3 245 aaKnown RBP11.33□□□□□ -0.6
NELFE-209ENST00000488426 TBCCD1Q9NVR7 557 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 MED29Q9NX70 200 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 QPCTLQ9NXS2 382 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 COPS3Q9UNS2 423 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 TNFSF11O14788 317 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 CLPXO76031 633 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 GLSO94925 669 aaPredicted RBP11.32□□□□□ -0.6
NELFE-209ENST00000488426 IGHG1P01857 330 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 POU3F2P20265 443 aaPredicted RBP11.32□□□□□ -0.6
NELFE-209ENST00000488426 HCCSP53701 268 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 OR12D2P58182 307 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 RPS25P62851 125 aaKnown RBP11.32□□□□□ -0.6
NELFE-209ENST00000488426 ARG2P78540 354 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 PLEKHG7Q6ZR37 379 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 LINC00299Q6ZSB3 139 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 GALNTL5Q7Z4T8 443 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 KCTD20Q7Z5Y7 419 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 RFLNBQ8N5W9 214 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 ZFP41Q8N8Y5 198 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 TMEM178AQ8NBL3 297 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 SLC25A44Q96H78 314 aaPredicted RBP11.32□□□□□ -0.6
NELFE-209ENST00000488426 MRPL13Q9BYD1 178 aaKnown RBP11.32□□□□□ -0.6
NELFE-209ENST00000488426 RHBDL2Q9NX52 303 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 PNMA8CA0A1B0GUJ8 204 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 TRDV1A0A1B0GX56 115 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 TVP23AA6NH52 213 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 PLPP2O43688 288 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 KHDRBS3O75525 346 aaKnown RBP11.32□□□□□ -0.6
NELFE-209ENST00000488426 HLA-DPB1P04440 258 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 NR2C1P13056 603 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 GNLYP22749 145 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 FGF9P31371 208 aaPredicted RBP11.32□□□□□ -0.6
NELFE-209ENST00000488426 TGFBR1P36897 503 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 MEOX1P50221 254 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 GBX2P52951 348 aaPredicted RBP11.32□□□□□ -0.6
NELFE-209ENST00000488426 PLGLB1Q02325 96 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 TRAM1Q15629 374 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 CCDC58Q4VC31 144 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 THEM4Q5T1C6 240 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 HBMQ6B0K9 141 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 IGFL2Q6UWQ7 119 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 CISD2Q8N5K1 135 aaKnown RBP11.32□□□□□ -0.6
NELFE-209ENST00000488426 ZFP62Q8NB50 900 aaPredicted RBP11.32□□□□□ -0.6
NELFE-209ENST00000488426 SYT14Q8NB59 555 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 NOXO1Q8NFA2 376 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 OR6N2Q8NGY6 317 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 ADGRG7Q96K78 797 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 DACH2Q96NX9 599 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 RBP7Q96R05 134 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 SF3B5Q9BWJ5 86 aaKnown RBP11.32□□□□□ -0.6
NELFE-209ENST00000488426 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.32□□□□□ -0.6
NELFE-209ENST00000488426 CCDC59Q9P031 241 aaKnown RBP11.32□□□□□ -0.6
NELFE-209ENST00000488426 LAMP5Q9UJQ1 280 aa11.32□□□□□ -0.6
NELFE-209ENST00000488426 ICE1Q9Y2F5 2266 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 HSPB2A8KAH6 182 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 EIF1AYO14602 144 aaKnown RBP11.31□□□□□ -0.6
NELFE-209ENST00000488426 RAMP1O60894 148 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 HLA-DQA2P01906 255 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 PGA4P0DJD7 388 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 PGA3P0DJD8 388 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 GAAP10253 952 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 PTGS2P35354 604 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 CLDN20P56880 219 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 CLRN1P58418 232 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 EGR3Q06889 387 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 MRPL28Q13084 256 aaKnown RBP11.31□□□□□ -0.6
NELFE-209ENST00000488426 HSPB2Q16082 182 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 TP53I3Q53FA7 332 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 ZNF766Q5HY98 468 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 PDSS1Q5T2R2 415 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 ZNF684Q5T5D7 378 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 VASNQ6EMK4 673 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 IGFL3Q6UXB1 125 aa11.31□□□□□ -0.6
NELFE-209ENST00000488426 TMEM251Q8N6I4 163 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms