RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 RHBDL2Q9NX52 303 aa10.7□□□□□ -0.7
PKP4-213ENST00000486254 ETV7Q9Y603 341 aa10.7□□□□□ -0.7
PKP4-213ENST00000486254 TTC28Q96AY4 2481 aa10.7□□□□□ -0.7
PKP4-213ENST00000486254 SMIM30A4D0T7 59 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 IFITM5A6NNB3 132 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 CTDSPLO15194 276 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 LRP3O75074 770 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 UBL3O95164 117 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 MT-CO3P00414 261 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 HLA-DQA2P01906 255 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 ISG15P05161 165 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 PGA4P0DJD7 388 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 PGA3P0DJD8 388 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 CALCBP10092 127 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 ATF1P18846 271 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 AZGP1P25311 298 aaKnown RBP10.69□□□□□ -0.7
PKP4-213ENST00000486254 SRD5A2P31213 254 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 PITPNBP48739 271 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 CD97P48960 835 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 ZNF133P52736 654 aaPredicted RBP10.69□□□□□ -0.7
PKP4-213ENST00000486254 KCNMB1Q16558 191 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 HIST3H3Q16695 136 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 MEP1BQ16820 701 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 TRIQKQ629K1 86 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 RAB43Q86YS6 212 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 GLB1L2Q8IW92 636 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 SAMD12Q8N8I0 201 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 ST7LQ8TDW4 575 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 THEM6Q8WUY1 208 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 HSD17B8Q92506 261 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 MCHR2Q969V1 340 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 OR5B2Q96R09 309 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 PIGQQ9BRB3 760 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 ABHD6Q9BV23 337 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 ELOVL3Q9HB03 270 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 TIGARQ9NQ88 270 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 SLCO1C1Q9NYB5 712 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 EXTL2Q9UBQ6 330 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 VCANP13611 3396 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 USP34Q70CQ2 3546 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 ZNF318Q5VUA4 2279 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 AHCTF1Q8WYP5 2266 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 KNTC1P50748 2209 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 EML6Q6ZMW3 1958 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 TRABD2BA6NFA1 517 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 FAM25AB3EWG3 89 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 FAM25CB3EWG5 89 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 FAM25GB3EWG6 89 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 ZIC3O60481 467 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 SRSF10O75494 262 aaKnown RBP10.69□□□□□ -0.7
PKP4-213ENST00000486254 SPARCP09486 303 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 PSKH1P11801 424 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 ZNF823P16415 610 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 FSTP19883 344 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 MNDAP41218 407 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 RFX2P48378 723 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 RAC1P63000 192 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 CSNK2A1P68400 391 aaPredicted RBP10.69□□□□□ -0.7
PKP4-213ENST00000486254 IL18Q14116 193 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 SF3A2Q15428 464 aaKnown RBP10.69□□□□□ -0.7
PKP4-213ENST00000486254 SLC25A35Q3KQZ1 300 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 UBE2NLQ5JXB2 153 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 PRAMEF20Q5VT98 475 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 KRT77Q7Z794 578 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 CATSPERDQ86XM0 798 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 C15orf40Q8WUR7 153 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 RNF133Q8WVZ7 376 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 KCNE4Q8WWG9 221 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 HTRA1Q92743 480 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 CCDC86Q9H6F5 360 aaKnown RBP10.69□□□□□ -0.7
PKP4-213ENST00000486254 NIPAL2Q9H841 368 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 P4HTMQ9NXG6 502 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 COA3Q9Y2R0 106 aaPredicted RBP10.69□□□□□ -0.7
PKP4-213ENST00000486254 R4GMQ9 66 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 V9GY05 133 aa10.69□□□□□ -0.7
PKP4-213ENST00000486254 CACNA1CQ13936 2221 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 LINC01387J3KSC0 135 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 SULT2B1O00204 365 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 TLX3O43711 291 aaPredicted RBP10.68□□□□□ -0.7
PKP4-213ENST00000486254 RPP14O95059 124 aaKnown RBP10.68□□□□□ -0.7
PKP4-213ENST00000486254 EIF4EP06730 217 aaKnown RBP10.68□□□□□ -0.7
PKP4-213ENST00000486254 TRAPPC2P0DI81 140 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 TRAPPC2BP0DI82 140 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 CD37P11049 281 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 LAP3P28838 519 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 OTX2P32243 289 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 KIR3DL2P43630 455 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 MMP16P51512 607 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 BIDP55957 195 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 OR2B6P58173 313 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 PITPNAQ00169 270 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 Q0VFX4 171 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 EIF2B1Q14232 305 aaKnown RBP10.68□□□□□ -0.7
PKP4-213ENST00000486254 P2RY14Q15391 338 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 INPP5JQ15735 1006 aaPredicted RBP10.68□□□□□ -0.7
PKP4-213ENST00000486254 WDR38Q5JTN6 314 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 ACER2Q5QJU3 275 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 MZT2BQ6NZ67 158 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 STAC2Q6ZMT1 411 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 NRARPQ7Z6K4 114 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms