RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 VTCN1Q7Z7D3 282 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 NRMQ8IXM6 262 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 MOSPD2Q8NHP6 518 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 NMD3Q96D46 503 aaKnown RBP12.95□□□□□ -0.34
PRKN-207ENST00000479615 CHODLQ9H9P2 273 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 SPAG4Q9NPE6 437 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 ABCD2Q9UBJ2 740 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 DUSP13Q9UII6 198 aa12.95□□□□□ -0.34
PRKN-207ENST00000479615 FAM32AQ9Y421 112 aaKnown RBP12.95□□□□□ -0.34
PRKN-207ENST00000479615 IGHV4-61A0A0C4DH41 118 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 LOC100289279A0A1B0GTE1 492 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 A0A1W2PPW3 197 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 NME4O00746 187 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 SERPINA1P01009 418 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 MMP7P09237 267 aaPredicted RBP12.94□□□□□ -0.34
PRKN-207ENST00000479615 ZNF250P15622 560 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 UCP2P55851 309 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 KLF3P57682 345 aaPredicted RBP12.94□□□□□ -0.34
PRKN-207ENST00000479615 CTXN1P60606 82 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 MYBPC1Q00872 1141 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 RIN1Q13671 783 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 PCGF3Q3KNV8 242 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 FAM209AQ5JX71 171 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 TMPRSS11FQ6ZWK6 438 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 SYT9Q86SS6 491 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 LRRC18Q8N456 261 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 SPATA3Q8NHX4 192 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 FGFBP3Q8TAT2 258 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 SYNPRQ8TBG9 265 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 SNX33Q8WV41 574 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 HDAC2Q92769 488 aaKnown RBP12.94□□□□□ -0.34
PRKN-207ENST00000479615 RDH5Q92781 318 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 FAM162AQ96A26 154 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 HSH2DQ96JZ2 352 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 ELAC2Q9BQ52 826 aaKnown RBP12.94□□□□□ -0.34
PRKN-207ENST00000479615 SYT3Q9BQG1 590 aa12.94□□□□□ -0.34
PRKN-207ENST00000479615 KRCC1Q9NPI7 259 aaPredicted RBP12.94□□□□□ -0.34
PRKN-207ENST00000479615 EIF3KQ9UBQ5 218 aaKnown RBP12.94□□□□□ -0.34
PRKN-207ENST00000479615 SAMD4AQ9UPU9 718 aaKnown RBP12.94□□□□□ -0.34
PRKN-207ENST00000479615 CHD3Q12873 2000 aaKnown RBP12.94□□□□□ -0.34
PRKN-207ENST00000479615 IGLV3-9A0A075B6K5 115 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 A0A087WUU8 490 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 A0A1W2PRQ8 180 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 ITGA2P17301 1181 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 PCMT1P22061 227 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 ACHEP22303 614 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 STOMP27105 288 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 YAP1P46937 504 aaKnown RBP12.93□□□□□ -0.34
PRKN-207ENST00000479615 PSME3P61289 254 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 DGCR6Q14129 220 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 SLC25A47Q6Q0C1 308 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 ARL9Q6T311 187 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 ZCCHC24Q8N2G6 241 aaKnown RBP12.93□□□□□ -0.34
PRKN-207ENST00000479615 ARIH2OSQ8N7S6 290 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 OR51A7Q8NH64 312 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 MSI2Q96DH6 328 aaKnown RBP12.93□□□□□ -0.34
PRKN-207ENST00000479615 ZNF416Q9BWM5 594 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 MYLK2Q9H1R3 596 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 NMNAT1Q9HAN9 279 aaPredicted RBP12.93□□□□□ -0.34
PRKN-207ENST00000479615 MAN2C1Q9NTJ4 1040 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 NKIRAS2Q9NYR9 191 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 GRHPRQ9UBQ7 328 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 TIMM10BQ9Y5J6 103 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 ENPP4Q9Y6X5 453 aa12.93□□□□□ -0.34
PRKN-207ENST00000479615 XKRYO14609 159 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 FFAR1O14842 300 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 PIP5K1CO60331 668 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 PRSS23O95084 383 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 SLC2A10O95528 541 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 TGFAP01135 160 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 LCKP06239 509 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 IGFBP1P08833 259 aaPredicted RBP12.92□□□□□ -0.34
PRKN-207ENST00000479615 CST2P09228 141 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 ZNF16P17020 682 aaPredicted RBP12.92□□□□□ -0.34
PRKN-207ENST00000479615 RHCEP18577 417 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 MAKP20794 623 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 TUBG1P23258 451 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 GDI2P50395 445 aaKnown RBP12.92□□□□□ -0.34
PRKN-207ENST00000479615 SMIM11AP58511 58 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 TEKQ02763 1124 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 TOP3AQ13472 1001 aaPredicted RBP12.92□□□□□ -0.34
PRKN-207ENST00000479615 KRT72Q14CN4 511 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 SGCAQ16586 387 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 NKPD1Q17RQ9 610 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 ZBED5Q49AG3 693 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 PABPC1L2AQ5JQF8 200 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 TMEM154Q6P9G4 183 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 CXXC5Q7LFL8 322 aaKnown RBP12.92□□□□□ -0.34
PRKN-207ENST00000479615 CPLX4Q7Z7G2 160 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 TREML1Q86YW5 311 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 LRRC75AQ8NAA5 344 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 NABP1Q96AH0 204 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 TPK1Q9H3S4 243 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 GORASP2Q9H8Y8 452 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 HINT3Q9NQE9 182 aaKnown RBP12.92□□□□□ -0.34
PRKN-207ENST00000479615 TUBG2Q9NRH3 451 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 RHCGQ9UBD6 479 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 UGT2A1Q9Y4X1 527 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 SNX13Q9Y5W8 968 aa12.92□□□□□ -0.34
PRKN-207ENST00000479615 C12orf71A8MTZ7 269 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms