RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CSMD2Q7Z408 3487 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 TEX13CA0A0J9YWL9 993 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 A0A1W2PNR3 127 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 DAPL1A0PJW8 107 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 SLC22A23A1A5C7 686 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 PINLYPA6NC86 204 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 OR6C68A6NDL8 312 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 A6NHS1 94 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 B4DXG7 233 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 LRRN3E7EW58 273 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 TNFSF11O14788 317 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 XPNPEP2O43895 674 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 NOL3O60936 208 aaKnown RBP6.24□□□□□ -1.41
SHQ1-207ENST00000475558 SLC43A1O75387 559 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 MRPL33O75394 65 aaKnown RBP6.24□□□□□ -1.41
SHQ1-207ENST00000475558 ZNF254O75437 659 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 SULT1C4O75897 302 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 SMNDC1O75940 238 aaKnown RBP eCLIP6.24□□□□□ -1.41
SHQ1-207ENST00000475558 AQP8O94778 261 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 CNOT4O95628 575 aaKnown RBP6.24□□□□□ -1.41
SHQ1-207ENST00000475558 F10P00742 488 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 APOC1P02654 83 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 CRHP06850 196 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 YES1P07947 543 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 SBK2P0C263 348 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 IFNGR1P15260 489 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 ATP6V1B1P15313 513 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 SPI1P17947 270 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 NPR2P20594 1047 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 IL11P20809 199 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 AGAP20933 346 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 GALP22466 123 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 PSMA1P25786 263 aaKnown RBP6.24□□□□□ -1.41
SHQ1-207ENST00000475558 CA7P43166 264 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 ZNF84P51523 738 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 P2RY4P51582 365 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 TDGF1P3P51864 188 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 ZNF133P52736 654 aaPredicted RBP6.24□□□□□ -1.41
SHQ1-207ENST00000475558 NUDT6P53370 316 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 TMBIM6P55061 237 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 CASP6P55212 293 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 CLDN18P56856 261 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 POU3F1Q03052 451 aaPredicted RBP6.24□□□□□ -1.41
SHQ1-207ENST00000475558 ZNF91Q05481 1191 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 RBPJQ06330 500 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 EGR3Q06889 387 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 GALEQ14376 348 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 IRF3Q14653 427 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 SPHARQ15513 63 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 TRAM1Q15629 374 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 CCDC58Q4VC31 144 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 LAIR2Q6ISS4 152 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 NIPAL3Q6P499 406 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 KCTD18Q6PI47 426 aaPredicted RBP6.24□□□□□ -1.41
SHQ1-207ENST00000475558 NHLRC1Q6VVB1 395 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 AHSA2Q719I0 299 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 FCRLAQ7L513 359 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 ZNF367Q7RTV3 350 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 SLC16A9Q7RTY1 509 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 GPAT4Q86UL3 456 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 GGNQ86UU5 652 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 MEX3DQ86XN8 651 aaKnown RBP6.24□□□□□ -1.41
SHQ1-207ENST00000475558 GLB1L2Q8IW92 636 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 ZNF295-AS1Q8N0V1 137 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 SYS1Q8N2H4 156 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 KLHL36Q8N4N3 616 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 NANOGP1Q8N7R0 232 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 OR9K2Q8NGE7 335 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 OR5M1Q8NGP8 315 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 OR52N1Q8NH53 320 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 ASB10Q8WXI3 467 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 LGALS12Q96DT0 336 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 CCDC120Q96HB5 630 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 ZFP3Q96NJ6 502 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 TSPAN32Q96QS1 320 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 CNN2Q99439 309 aaKnown RBP6.24□□□□□ -1.41
SHQ1-207ENST00000475558 TM9SF2Q99805 663 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 COQ7Q99807 217 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 SPOCK3Q9BQ16 436 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 MRPL13Q9BYD1 178 aaKnown RBP6.24□□□□□ -1.41
SHQ1-207ENST00000475558 LINC00470Q9BZP3 86 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 PRDM14Q9GZV8 571 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 DEFB127Q9H1M4 99 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 KCNN2Q9H2S1 579 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 MARCH7Q9H992 704 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 SIAEQ9HAT2 523 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 SRA1Q9HD15 236 aaKnown RBP6.24□□□□□ -1.41
SHQ1-207ENST00000475558 AMBNQ9NP70 447 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 ACOT13Q9NPJ3 140 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 BABAM2Q9NXR7 383 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 DNAJC27Q9NZQ0 273 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 ERVK-18Q9QC07 812 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 GPR52Q9Y2T5 361 aa6.24□□□□□ -1.41
SHQ1-207ENST00000475558 DCHS2Q6V1P9 2916 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 A0A0G2JMM0 328 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 A0A1W2PPB8 328 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 A0A1W2PRS3 328 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 C17orf51A8MQB3 221 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 FAM166BA8MTA8 275 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 KIR3DP1A8MWS1 328 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms