RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 MDP1Q86V88 176 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 FAM169BQ8N8A8 192 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 IL17RDQ8NFM7 739 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 OR13C2Q8NGS9 318 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 SLC25A44Q96H78 314 aaPredicted RBP13.12□□□□□ -0.31
VARS-223ENST00000474643 PLK3Q9H4B4 646 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 CHODLQ9H9P2 273 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 ARMC1Q9NVT9 282 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 STX18Q9P2W9 335 aaKnown RBP13.12□□□□□ -0.31
VARS-223ENST00000474643 LPAR3Q9UBY5 353 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 HIF3AQ9Y2N7 669 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 TRBV4-1A0A0J9YWV2 114 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 LOC390937A0A1W2PQ73 354 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 SH3PXD2BA1X283 911 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 OR10H3O60404 316 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 ENTPD5O75356 428 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 IGKV3-15P01624 115 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 CELA3BP08861 270 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 IFNGR2P38484 337 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 CTXN1P60606 82 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 SNTB2Q13425 540 aaKnown RBP13.11□□□□□ -0.31
VARS-223ENST00000474643 GSG1Q2KHT4 349 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 ANKDD1AQ495B1 522 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 PHYHD1Q5SRE7 291 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 KRT80Q6KB66 452 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 ZNF771Q7L3S4 317 aaPredicted RBP13.11□□□□□ -0.31
VARS-223ENST00000474643 IGFN1Q86VF2 1251 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 ADGRG5Q8IZF4 528 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 SVOPLQ8N434 492 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 OR4K5Q8NGD3 323 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 REPIN1Q9BWE0 567 aaKnown RBP13.11□□□□□ -0.31
VARS-223ENST00000474643 GLTPQ9NZD2 209 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 CRNNQ9UBG3 495 aaPredicted RBP13.11□□□□□ -0.31
VARS-223ENST00000474643 KCNS2Q9ULS6 477 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 ABCA1O95477 2261 aa13.11□□□□□ -0.31
VARS-223ENST00000474643 IGLV1-44P01699 117 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 CALCRP30988 508 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 NR4A2P43354 598 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 PTDSS1P48651 473 aaKnown RBP13.1□□□□□ -0.31
VARS-223ENST00000474643 PPOXP50336 477 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 PIGFQ07326 219 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 CD47Q08722 323 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 CCNIQ14094 377 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 EFNB3Q15768 340 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 ZBED5Q49AG3 693 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 FAM166AQ6J272 317 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 NHLRC1Q6VVB1 395 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 TMPRSS11FQ6ZWK6 438 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 SPATA24Q86W54 205 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 SYT14Q8NB59 555 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 NUP37Q8NFH4 326 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 ASB10Q8WXI3 467 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 ZNF837Q96EG3 531 aaPredicted RBP13.1□□□□□ -0.31
VARS-223ENST00000474643 RSRC1Q96IZ7 334 aaKnown RBP13.1□□□□□ -0.31
VARS-223ENST00000474643 DHRS1Q96LJ7 313 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 TXNIPQ9H3M7 391 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 NELFAQ9H3P2 528 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 DENND2DQ9H6A0 471 aaPredicted RBP13.1□□□□□ -0.31
VARS-223ENST00000474643 ZNF442Q9H7R0 627 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 SEC61A2Q9H9S3 476 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 CMAHPQ9Y471 501 aa13.1□□□□□ -0.31
VARS-223ENST00000474643 IGHV2OR16-5A0A0B4J2B6 119 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 LOC100289279A0A1B0GTE1 492 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 UNC119BA6NIH7 251 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 TNFRSF11BO00300 401 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 CDC42EP2O14613 210 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 KRT36O76013 467 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 HLA-HP01893 362 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 FAM157CP0CG43 387 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 B4GALT1P15291 398 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 ACADSP16219 412 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 THBS4P35443 961 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 ZNF84P51523 738 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 RPL27P61353 136 aaKnown RBP13.09□□□□□ -0.31
VARS-223ENST00000474643 MYBPC1Q00872 1141 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 KPNB1Q14974 876 aaKnown RBP13.09□□□□□ -0.31
VARS-223ENST00000474643 SEC23BQ15437 767 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 MST1LQ2TV78 715 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 WDFY1Q8IWB7 410 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 NOXO1Q8NFA2 376 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 CANT1Q8WVQ1 401 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 TMEM158Q8WZ71 300 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 TMEM54Q969K7 222 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 FOXB1Q99853 325 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 REEP1Q9H902 201 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 FBXL3Q9UKT7 428 aa13.09□□□□□ -0.31
VARS-223ENST00000474643 GNGT2O14610 69 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 DHHO43323 396 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 LMX1BO60663 402 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 FKBP6O75344 327 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 TRMUO75648 421 aaKnown RBP13.08□□□□□ -0.32
VARS-223ENST00000474643 UBL3O95164 117 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 NDUFB2O95178 105 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 FARS2O95363 451 aaKnown RBP13.08□□□□□ -0.32
VARS-223ENST00000474643 QDPRP09417 244 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 PGA4P0DJD7 388 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 PGA3P0DJD8 388 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 IGHV4-31P0DP07 118 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 FCGR1AP12314 374 aa13.08□□□□□ -0.32
VARS-223ENST00000474643 NR2C1P13056 603 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms