RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 SLC26A3P40879 764 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 RAB9AP51151 201 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 BCAP31P51572 246 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 UGT2B15P54855 530 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 GGTLC2Q14390 218 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 SGCAQ16586 387 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 PIGGQ5H8A4 983 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 CASC10Q5T4H9 136 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 OTPQ5XKR4 325 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 FRMPD2BQ6IN97 320 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 DNAJC24Q6P3W2 148 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 FAM184AQ8NB25 1140 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 OR10R2Q8NGX6 335 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 OR2G3Q8NGZ4 309 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 FAM3DQ96BQ1 224 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 LRRC58Q96CX6 371 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 DYNLL2Q96FJ2 89 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 P2RX4Q99571 388 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 RANBP3Q9H6Z4 567 aaPredicted RBP2.85□□□□□ -1.95
VPS13A-209ENST00000467124 C8orf33Q9H7E9 229 aaPredicted RBP2.85□□□□□ -1.95
VPS13A-209ENST00000467124 CYP3A43Q9HB55 503 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 ACP6Q9NPH0 428 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 CTPS2Q9NRF8 586 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 MTCH1Q9NZJ7 389 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 MYEF2Q9P2K5 600 aaKnown RBP2.85□□□□□ -1.95
VPS13A-209ENST00000467124 PCYOX1Q9UHG3 505 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 PDS5BQ9NTI5 1447 aa2.85□□□□□ -1.95
VPS13A-209ENST00000467124 TRBV9A0A0B4J1U6 114 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 A6NDX4 124 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 MRPS12O15235 138 aaKnown RBP2.84□□□□□ -1.95
VPS13A-209ENST00000467124 SUPT3HO75486 399 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 SCELO95171 688 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 ZNF30P17039 623 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 HRH1P35367 487 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 NUDT1P36639 197 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 RAB7AP51149 207 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 CLDN8P56748 225 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 ADARB1P78563 741 aaKnown RBP2.84□□□□□ -1.95
VPS13A-209ENST00000467124 PAX5Q02548 391 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 CLINT1Q14677 625 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 PLCXD3Q63HM9 321 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 CMC1Q7Z7K0 106 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 OAFQ86UD1 273 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 Q8N9W7 124 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 TTC29Q8NA56 475 aaPredicted RBP2.84□□□□□ -1.95
VPS13A-209ENST00000467124 OR9G4Q8NGQ1 327 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 ISG20Q96AZ6 181 aaKnown RBP2.84□□□□□ -1.95
VPS13A-209ENST00000467124 C8orf44Q96CB5 159 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 PIK3IP1Q96FE7 263 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 OR2M2Q96R28 347 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 NRIP2Q9BQI9 281 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 OSBPL10Q9BXB5 764 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 OR2AG1Q9H205 316 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 NANOGQ9H9S0 305 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 PDFQ9HBH1 243 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 ZNF225Q9UK10 706 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 PRG3Q9Y2Y8 225 aaPredicted RBP2.84□□□□□ -1.95
VPS13A-209ENST00000467124 KIF25-AS1Q9Y6Z4 181 aa2.84□□□□□ -1.95
VPS13A-209ENST00000467124 PRSS37A4D1T9 235 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 BOLA2-SMG1P6H3BVE0 249 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 NUPL2O15504 423 aaKnown RBP2.83□□□□□ -1.96
VPS13A-209ENST00000467124 ZNF861PO60384 105 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 FKBP6O75344 327 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 CLDN11O75508 207 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 FCN3O75636 299 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 CD160O95971 181 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 IFNW1P05000 195 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 ZNF17P17021 662 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 RCC1P18754 421 aaPredicted RBP2.83□□□□□ -1.96
VPS13A-209ENST00000467124 ELK1P19419 428 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 GGT1P19440 569 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 RPS10P46783 165 aaKnown RBP2.83□□□□□ -1.96
VPS13A-209ENST00000467124 SLC11A1P49279 550 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 CCR6P51684 374 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 LYZP61626 148 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 STXBP1P61764 594 aaKnown RBP2.83□□□□□ -1.96
VPS13A-209ENST00000467124 RPS15AP62244 130 aaKnown RBP2.83□□□□□ -1.96
VPS13A-209ENST00000467124 MXD1Q05195 221 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 SMARCB1Q12824 385 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 DNAJC3Q13217 504 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 TRAM2Q15035 370 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 PON3Q15166 354 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 SF3A2Q15428 464 aaKnown RBP2.83□□□□□ -1.96
VPS13A-209ENST00000467124 PSMD5Q16401 504 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 GABRA6Q16445 453 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 CCNJQ5T5M9 372 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 MICU2Q8IYU8 434 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 MREGQ8N565 214 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 FAM71E2Q8N5Q1 922 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 NPBQ8NG41 125 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 OR56A4Q8NGH8 313 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 AURKBQ96GD4 344 aaPredicted RBP2.83□□□□□ -1.96
VPS13A-209ENST00000467124 COL21A1Q96P44 957 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 XPO6Q96QU8 1125 aaKnown RBP2.83□□□□□ -1.96
VPS13A-209ENST00000467124 ANKRD60Q9BZ19 345 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 BLZF1Q9H2G9 400 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 TMEM9BQ9NQ34 198 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 MMP26Q9NRE1 261 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms