RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 SLC27A4Q6P1M0 643 aa12.28□□□□□ -0.44
TIMP1-205ENST00000456754 ZBTB49Q6ZSB9 765 aa12.28□□□□□ -0.44
TIMP1-205ENST00000456754 BCDIN3DQ7Z5W3 292 aaKnown RBP12.28□□□□□ -0.44
TIMP1-205ENST00000456754 ADCK1Q86TW2 530 aa12.28□□□□□ -0.44
TIMP1-205ENST00000456754 SLC22A24Q8N4F4 322 aa12.28□□□□□ -0.44
TIMP1-205ENST00000456754 C1orf162Q8NEQ5 155 aaPredicted RBP12.28□□□□□ -0.44
TIMP1-205ENST00000456754 BBS1Q8NFJ9 593 aa12.28□□□□□ -0.44
TIMP1-205ENST00000456754 NRG4Q8WWG1 115 aa12.28□□□□□ -0.44
TIMP1-205ENST00000456754 EME1Q96AY2 570 aa12.28□□□□□ -0.44
TIMP1-205ENST00000456754 DACH2Q96NX9 599 aa12.28□□□□□ -0.44
TIMP1-205ENST00000456754 TVP23BQ9NYZ1 205 aa12.28□□□□□ -0.44
TIMP1-205ENST00000456754 STX18Q9P2W9 335 aaKnown RBP12.28□□□□□ -0.44
TIMP1-205ENST00000456754 B9D1Q9UPM9 204 aa12.28□□□□□ -0.44
TIMP1-205ENST00000456754 ROS1P08922 2347 aa12.27□□□□□ -0.44
TIMP1-205ENST00000456754 ZAR1LA6NP61 321 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 RRP9O43818 475 aaKnown RBP12.27□□□□□ -0.45
TIMP1-205ENST00000456754 PRKYO43930 277 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 SNAP29O95721 258 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 PLAUP00749 431 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 RENP00797 406 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 LAP3P28838 519 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 CAPZA2P47755 286 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 CENPAP49450 140 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 TGFBR3Q03167 851 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 NPRL3Q12980 569 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 SLX4IPQ5VYV7 408 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 OR7E24Q6IFN5 339 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 B3GLCTQ6Y288 498 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 FOXL2NBQ6ZUU3 175 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 ZNF627Q7L945 461 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 MDP1Q86V88 176 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 FAM222BQ8WU58 562 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 DNAJC9Q8WXX5 260 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 HSD17B8Q92506 261 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 PTP4A1Q93096 173 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 UBE2FQ969M7 185 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 MARVELD3Q96A59 401 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 OTULINQ96BN8 352 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 C9orf16Q9BUW7 83 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 GABARAPL3Q9BY60 117 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 NMNAT2Q9BZQ4 307 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 TOR3AQ9H497 397 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 HINT3Q9NQE9 182 aaKnown RBP12.27□□□□□ -0.45
TIMP1-205ENST00000456754 CMC2Q9NRP2 79 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 AASSQ9UDR5 926 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 NDRG3Q9UGV2 375 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 BAIAP2Q9UQB8 552 aa12.27□□□□□ -0.45
TIMP1-205ENST00000456754 HRNRQ86YZ3 2850 aaPredicted RBP12.27□□□□□ -0.45
TIMP1-205ENST00000456754 HEATR1Q9H583 2144 aaKnown RBP12.26□□□□□ -0.45
TIMP1-205ENST00000456754 CRYBG3Q68DQ2 2970 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 DPRXA6NFQ7 191 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 TVP23AA6NH52 213 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 E9PQ18 207 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 H0YHG0 523 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 KHDRBS3O75525 346 aaKnown RBP12.26□□□□□ -0.45
TIMP1-205ENST00000456754 GAAP10253 952 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 CD79AP11912 226 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 CRYGSP22914 178 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 ZNF84P51523 738 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 SH3BGRP55822 239 aaPredicted RBP12.26□□□□□ -0.45
TIMP1-205ENST00000456754 KRTAP10-9P60411 292 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 ESRRGP62508 458 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 ENDOGQ14249 297 aaKnown RBP12.26□□□□□ -0.45
TIMP1-205ENST00000456754 C12orf73Q69YU5 71 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 PLBD1Q6P4A8 553 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 C17orf78Q8N4C9 275 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 C11orf40Q8WZ69 217 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 FBXO17Q96EF6 278 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 PIK3IP1Q96FE7 263 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 PLPPR2Q96GM1 343 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 MS4A3Q96HJ5 214 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 OR10A4Q9H209 315 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 DCLRE1BQ9H816 532 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 RNPEPL1Q9HAU8 725 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 POLE4Q9NR33 117 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 B3GNT2Q9NY97 397 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 KLHL21Q9UJP4 597 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 RRP15Q9Y3B9 282 aaKnown RBP12.26□□□□□ -0.45
TIMP1-205ENST00000456754 CACNA1DQ01668 2161 aa12.26□□□□□ -0.45
TIMP1-205ENST00000456754 AKAP6Q13023 2319 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 ARPC4-TTLL3A0A0A6YYG9 625 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.25□□□□□ -0.45
TIMP1-205ENST00000456754 A6NNC1 897 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 RIIAD1A6NNX1 92 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 M0R1B8 84 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 CASQ2O14958 399 aaPredicted RBP12.25□□□□□ -0.45
TIMP1-205ENST00000456754 MGRN1O60291 552 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 TFP02787 698 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 HRGP04196 525 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 OR8G3PP0DMU2 310 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 PPP3CBP16298 524 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 SPI1P17947 270 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 RPS27P42677 84 aaKnown RBP12.25□□□□□ -0.45
TIMP1-205ENST00000456754 UBE2NP61088 152 aaKnown RBP12.25□□□□□ -0.45
TIMP1-205ENST00000456754 MRPS34P82930 218 aaKnown RBP12.25□□□□□ -0.45
TIMP1-205ENST00000456754 SNAPC1Q16533 368 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 OGFRL1Q5TC84 451 aaPredicted RBP12.25□□□□□ -0.45
TIMP1-205ENST00000456754 ZBTB46Q86UZ6 589 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 CPOQ8IVL8 374 aa12.25□□□□□ -0.45
TIMP1-205ENST00000456754 NEUROG1Q92886 237 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms