RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 ZNRF4Q8WWF5 429 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 NABP1Q96AH0 204 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 CNBD2Q96M20 576 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 YTHDF1Q9BYJ9 559 aaKnown RBP9.9□□□□□ -0.82
TRAF4-206ENST00000454852 OR10A4Q9H209 315 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 MED20Q9H944 212 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 SRA1Q9HD15 236 aaKnown RBP9.9□□□□□ -0.82
TRAF4-206ENST00000454852 TMEM38BQ9NVV0 291 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 FKBP14Q9NWM8 211 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 ELOVL5Q9NYP7 299 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 TAS2R16Q9NYV7 291 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 DNAJC27Q9NZQ0 273 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 KCNG2Q9UJ96 466 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 ERRFI1Q9UJM3 462 aaPredicted RBP9.9□□□□□ -0.82
TRAF4-206ENST00000454852 COA3Q9Y2R0 106 aaPredicted RBP9.9□□□□□ -0.82
TRAF4-206ENST00000454852 RPL36Q9Y3U8 105 aaKnown RBP9.9□□□□□ -0.82
TRAF4-206ENST00000454852 FREM1Q5H8C1 2179 aa9.9□□□□□ -0.83
TRAF4-206ENST00000454852 TRIM64A6NGJ6 449 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 J3QRE1 110 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 KRT33AO76009 404 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 TFP02787 698 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 GYPBP06028 91 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 DBTP11182 482 aaKnown RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 HOXB1P14653 301 aaPredicted RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 PSMB1P20618 241 aaKnown RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 IGHV1-2P23083 117 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 GSTT1P30711 240 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 FMO3P31513 532 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 MTNR1AP48039 350 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 LSM6P62312 80 aaKnown RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 TGFBR3Q03167 851 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 ZNF91Q05481 1191 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 RAB40BQ12829 278 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 FAPQ12884 760 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 APOFQ13790 326 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 RBM48Q5RL73 367 aaKnown RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 NCCRP1Q6ZVX7 275 aaPredicted RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 BCDIN3DQ7Z5W3 292 aaKnown RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 DPPA2Q7Z7J5 298 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 SYT9Q86SS6 491 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 LIX1LQ8IVB5 337 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 TIGD4Q8IY51 512 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 C17orf78Q8N4C9 275 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 PRR7Q8TB68 274 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 ZNF837Q96EG3 531 aaPredicted RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 MNTQ99583 582 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 FOXB1Q99853 325 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 USB1Q9BQ65 265 aaKnown RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 JAM3Q9BX67 310 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 OPN3Q9H1Y3 402 aaPredicted RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 OR51V1Q9H2C8 321 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 NELFAQ9H3P2 528 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 SIAEQ9HAT2 523 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 POLE4Q9NR33 117 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 MRPL22Q9NWU5 206 aaKnown RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 COQ3Q9NZJ6 369 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 CNOT2Q9NZN8 540 aaKnown RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 AASSQ9UDR5 926 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 SLC5A6Q9Y289 635 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 EXOGQ9Y2C4 368 aaKnown RBP9.89□□□□□ -0.83
TRAF4-206ENST00000454852 NBASA2RRP1 2371 aa9.89□□□□□ -0.83
TRAF4-206ENST00000454852 ZNF462Q96JM2 2506 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 IRGMA1A4Y4 181 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 SLC1A7O00341 560 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 IGHV3-9P01782 118 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 SBK2P0C263 348 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 MSR1P21757 451 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 BMP5P22003 454 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 PAX7P23759 505 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 CRHBPP24387 322 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 PYCR1P32322 319 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 FOXG1P55316 489 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-206ENST00000454852 ARF1P84077 181 aaKnown RBP9.88□□□□□ -0.83
TRAF4-206ENST00000454852 GABRA6Q16445 453 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 SMN1Q16637 294 aaKnown RBP9.88□□□□□ -0.83
TRAF4-206ENST00000454852 KLHL12Q53G59 568 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 KLHL22Q53GT1 634 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 SFRP5Q5T4F7 317 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 OR7E24Q6IFN5 339 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 ANKRD16Q6P6B7 361 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 XKRXQ6PP77 449 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 UGT2A3Q6UWM9 527 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 SSX8Q7RTT4 187 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 EGFL6Q8IUX8 553 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 CCDC36Q8IYA8 594 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 UBE2J2Q8N2K1 259 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 ZNF808Q8N4W9 903 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-206ENST00000454852 ZNF433Q8N7K0 673 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-206ENST00000454852 OR1K1Q8NGR3 316 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 NSMAFQ92636 917 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 BCL2L2Q92843 193 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-206ENST00000454852 SIGLEC11Q96RL6 698 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 RBM24Q9BX46 236 aaKnown RBP9.88□□□□□ -0.83
TRAF4-206ENST00000454852 HDHD5Q9BXW7 423 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 DUSP21Q9H596 190 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 ADGRL4Q9HBW9 690 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 FGF20Q9NP95 211 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-206ENST00000454852 PSORS1C1Q9UIG5 152 aa9.88□□□□□ -0.83
TRAF4-206ENST00000454852 PCDHGB5Q9Y5G0 923 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms