RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 DEFB133Q30KQ1 61 aa9.42□□□□□ -0.9
CLSTN1-203ENST00000435891 CHRDL2Q6WN34 429 aa9.42□□□□□ -0.9
CLSTN1-203ENST00000435891 LRRTM1Q86UE6 522 aa9.42□□□□□ -0.9
CLSTN1-203ENST00000435891 SMRP1Q8NCR6 262 aa9.42□□□□□ -0.9
CLSTN1-203ENST00000435891 C1orf216Q8TAB5 229 aa9.42□□□□□ -0.9
CLSTN1-203ENST00000435891 PRODH2Q9UF12 536 aa9.42□□□□□ -0.9
CLSTN1-203ENST00000435891 KCNG2Q9UJ96 466 aa9.42□□□□□ -0.9
CLSTN1-203ENST00000435891 SPAG17Q6Q759 2223 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 OR4C45A6NMZ5 311 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 GABARAPH6UMI1 98 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 ARPC1BO15143 372 aaKnown RBP9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 PNMTP11086 282 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 RAD52P43351 418 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 BLKP51451 505 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 ZP2Q05996 745 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 LINC00303Q3SY05 128 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 TMEM69Q5SWH9 247 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 SLC35D2Q76EJ3 337 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 MARCH3Q86UD3 253 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 TMPRSS12Q86WS5 348 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 STX12Q86Y82 276 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 OR2G2Q8NGZ5 317 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 THEM6Q8WUY1 208 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 LIPHQ8WWY8 451 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 TCF7L1Q9HCS4 588 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 PCDHGA5Q9Y5G8 931 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 DISC1C4P0D8 188 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 TXNL1O43396 289 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 HCRTR2O43614 444 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 ITGA10O75578 1167 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 IGLV3-19P01714 112 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 HOXB1P14653 301 aaPredicted RBP9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 PSMB1P20618 241 aaKnown RBP9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 SKP1P63208 163 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 MC2RQ01718 297 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 FAM198BQ6UWH4 519 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 BIVMQ86UB2 503 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 DND1Q8IYX4 353 aaKnown RBP9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 TMEM106AQ96A25 262 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 ADIPOR1Q96A54 375 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 CCDC74AQ96AQ1 378 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 TSNAXQ99598 290 aaKnown RBP9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 TAS2R3Q9NYW6 316 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 LAMP5Q9UJQ1 280 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 KHDRBS3O75525 346 aaKnown RBP9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 KRT33AO76009 404 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 FBXO45P0C2W1 286 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 ANXA7P20073 488 aaKnown RBP9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 ALOX5APP20292 161 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 ADH7P40394 386 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 PPICP45877 212 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 EFNB2P52799 333 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 VWA2Q5GFL6 755 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 SEZ6L2Q6UXD5 910 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 TFAP2EQ6VUC0 442 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 MAMSTRQ6ZN01 415 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 FAM220AQ7Z4H9 259 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 ZNF440Q8IYI8 595 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 C12orf45Q8N5I9 185 aaPredicted RBP9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 PHYHIPQ92561 330 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 HGDQ93099 445 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 INTS12Q96CB8 462 aaKnown RBP9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 HAVCR1Q96D42 359 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 CMSS1Q9BQ75 279 aaKnown RBP9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 PLEKHA1Q9HB21 404 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 CA10Q9NS85 328 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 TAS2R5Q9NYW4 299 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 KLHL9Q9P2J3 617 aa9.41□□□□□ -0.9
CLSTN1-203ENST00000435891 FREM3P0C091 2139 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 TRBV5-5A0A0J9YX44 114 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 STMND1H3BQB6 276 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 DDAH2O95865 285 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 WNT11O96014 354 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 IGKV3-11P04433 115 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 KCNJ3P48549 501 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 HYAL4Q2M3T9 481 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 SLC6A19Q695T7 634 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 SLC25A25Q6KCM7 469 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 LRRN1Q6UXK5 716 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 BAIAP2L2Q6UXY1 529 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 CDH26Q8IXH8 852 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 SLC25A36Q96CQ1 311 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 S100A16Q96FQ6 103 aaKnown RBP9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 C7orf50Q9BRJ6 194 aaKnown RBP9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 MESP1Q9BRJ9 268 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 NUDT9Q9BW91 350 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 ARL6Q9H0F7 186 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 RPH3AQ9Y2J0 694 aaPredicted RBP9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 SLC6A5Q9Y345 797 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 FER1L5A0AVI2 2057 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 TXNDC12O95881 172 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 APEHP13798 732 aaKnown RBP9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 ITPKBP27987 946 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 KIR3DL2P43630 455 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 RAG2P55895 527 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 TAS2R20P59543 309 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 SFRP5Q5T4F7 317 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 C9orf40Q8IXQ3 194 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 ZNF721Q8TF20 911 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 NSMAFQ92636 917 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms