RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 GMPRP36959 345 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 MLLT11Q13015 90 aaPredicted RBP10.3□□□□□ -0.76
SCN4A-201ENST00000435607 SOHLH1Q5JUK2 328 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 MOB3BQ86TA1 216 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 YRDCQ86U90 279 aaKnown RBP10.3□□□□□ -0.76
SCN4A-201ENST00000435607 TEX29Q8N6K0 151 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 PINX1Q96BK5 328 aaKnown RBP10.3□□□□□ -0.76
SCN4A-201ENST00000435607 C1QTNF6Q9BXI9 259 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 A3GALT2U3KPV4 340 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 MEIKINA0A087WXM9 373 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 SLC22A20A6NK97 555 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 SRFP11831 508 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 TBXA2RP21731 343 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 GIFP27352 417 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 RPL35P42766 123 aaKnown RBP10.3□□□□□ -0.76
SCN4A-201ENST00000435607 HTRA3P83110 453 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 SLC5A12Q1EHB4 618 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 MBOAT2Q6ZWT7 520 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 LFNGQ8NES3 379 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 CIB3Q96Q77 187 aaPredicted RBP10.3□□□□□ -0.76
SCN4A-201ENST00000435607 TAAR6Q96RI8 345 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 SLC35D3Q5M8T2 416 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 KDM8Q8N371 416 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 PGBD5Q8N414 524 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 SEH1LQ96EE3 360 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 BORCS6Q96GS4 357 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 SIAEQ9HAT2 523 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 NRIP3Q9NQ35 241 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 AMMECR1Q9Y4X0 333 aaPredicted RBP10.3□□□□□ -0.76
SCN4A-201ENST00000435607 KCPQ6ZWJ8 1503 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 DSCR3O14972 297 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 XRCC2O43543 280 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 TCEAL1Q15170 157 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 C1orf140Q5VVS0 124 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 LYRM4Q9HD34 91 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 MYOZ1Q9NP98 299 aaPredicted RBP10.3□□□□□ -0.76
SCN4A-201ENST00000435607 ABCD3P28288 659 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 CST5P28325 142 aaPredicted RBP10.3□□□□□ -0.76
SCN4A-201ENST00000435607 KIAA1024LP59773 190 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 CDK5R2Q13319 367 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 SFTPA2Q8IWL1 248 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 SFTPA1Q8IWL2 248 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 OR6K3Q8NGY3 331 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 ACPTQ9BZG2 426 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 IDSB3KWA1 339 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 SLCO2B1O94956 709 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 MBP02144 154 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 CHRM2P08172 466 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 RPS17P08708 135 aaKnown RBP10.29□□□□□ -0.76
SCN4A-201ENST00000435607 CCR7P32248 378 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 FAM189BP81408 668 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 ACOT6Q3I5F7 207 aaPredicted RBP10.29□□□□□ -0.76
SCN4A-201ENST00000435607 MFSD4AQ8N468 514 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 APH1BQ8WW43 257 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 RAB6CQ9H0N0 254 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 P4HTMQ9NXG6 502 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 ADAMTS5Q9UNA0 930 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 SIAH2O43255 324 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 PSMB5P28074 263 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 EVI2BP34910 448 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 CA5AP35218 305 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 CLINT1Q14677 625 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 MARCH8Q5T0T0 291 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 TP53INP2Q8IXH6 220 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 FAM71CQ8NEG0 241 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 RAB18Q9NP72 206 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 TRAV17A0A0B4J275 112 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 FAM183AA6NL82 134 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 P2RY10O00398 339 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 CD14P08571 375 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 DUSP1P28562 367 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 ADIRFQ15847 76 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 LILRA2Q8N149 483 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 PHYHIPQ92561 330 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 CCDC74BQ96LY2 380 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 LIN28AQ9H9Z2 209 aaKnown RBP10.29□□□□□ -0.76
SCN4A-201ENST00000435607 ASXL3Q9C0F0 2248 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 C5orf49A4QMS7 147 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 PPIHO43447 177 aaKnown RBP10.29□□□□□ -0.76
SCN4A-201ENST00000435607 GABRA5P31644 462 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 CTSCP53634 463 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 ZNF85Q03923 595 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 SLC10A2Q12908 348 aaPredicted RBP10.29□□□□□ -0.76
SCN4A-201ENST00000435607 HFEQ30201 348 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 THEM4Q5T1C6 240 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 ADGRE4PQ86SQ3 457 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 CCDC71Q8IV32 467 aaPredicted RBP10.29□□□□□ -0.76
SCN4A-201ENST00000435607 NPWQ8N729 165 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 OR52H1Q8NGJ2 320 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 A0A087WZY1 265 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 LINC01387J3KSC0 135 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 IGHV3-9P01782 118 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 IVDP26440 423 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 PTTG1IPP53801 180 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 SELENBP1Q13228 472 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 EIF3IQ13347 325 aaKnown RBP10.29□□□□□ -0.76
SCN4A-201ENST00000435607 EBPQ15125 230 aaKnown RBP10.29□□□□□ -0.76
SCN4A-201ENST00000435607 Q499Y3 187 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 MOB1BQ7L9L4 216 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 LYSMD1Q96S90 227 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms