RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 ZNF92Q03936 586 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 TWF1Q12792 350 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 TCP10Q12799 353 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 SMARCB1Q12824 385 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 IL17AQ16552 155 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 RNF212Q495C1 297 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 C22orf42Q6IC83 251 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 ANKRD26P1Q6NSI1 321 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 SASS6Q6UVJ0 657 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 ANGPTL8Q6UXH0 198 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 ZNF836Q6ZNA1 936 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 TMEM179Q6ZVK1 233 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 CAMK2N1Q7Z7J9 78 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 RALGPS2Q86X27 583 aaPredicted RBP4.21□□□□□ -1.74
USP54-206ENST00000433394 MS4A15Q8N5U1 240 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 COMMD1Q8N668 190 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 STARD8Q92502 1023 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 SGK3Q96BR1 496 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 PIK3IP1Q96FE7 263 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 SLC35E1Q96K37 410 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 ZIM3Q96PE6 472 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 PAIP2Q9BPZ3 127 aaKnown RBP4.21□□□□□ -1.74
USP54-206ENST00000433394 MMP26Q9NRE1 261 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 XCL2Q9UBD3 114 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 RALGAPBQ86X10 1494 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 NLRP1Q9C000 1473 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 RLFQ13129 1914 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 CHD4Q14839 1912 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 CLTCL1P53675 1640 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 ADGRB3O60242 1522 aa4.21□□□□□ -1.74
USP54-206ENST00000433394 CLTCQ00610 1675 aaKnown RBP4.2□□□□□ -1.74
USP54-206ENST00000433394 ERVK-7P63135 1459 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 DNALI1O14645 258 aaPredicted RBP4.2□□□□□ -1.74
USP54-206ENST00000433394 CLPXO76031 633 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 CLIC3O95833 236 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 INSP01308 110 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 IGHV4-34P06331 123 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 NSG1P42857 185 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 RORCP51449 518 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 CCR8P51685 355 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 AQP6Q13520 282 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 SF3A2Q15428 464 aaKnown RBP4.2□□□□□ -1.74
USP54-206ENST00000433394 PPM1LQ5SGD2 360 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 LCN12Q6JVE5 192 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 GABRG1Q8N1C3 465 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 FAM71E2Q8N5Q1 922 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 OR4F15Q8NGB8 312 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 OR1S2Q8NGQ3 325 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 PLEKHF1Q96S99 279 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 SLC29A1Q99808 456 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 DEFB127Q9H1M4 99 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 GEMIN7Q9H840 131 aaKnown RBP4.2□□□□□ -1.74
USP54-206ENST00000433394 PLSCR3Q9NRY6 295 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 C20orf96Q9NUD7 363 aaPredicted RBP4.2□□□□□ -1.74
USP54-206ENST00000433394 GPATCH2LQ9NWQ4 482 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 MRPL22Q9NWU5 206 aaKnown RBP4.2□□□□□ -1.74
USP54-206ENST00000433394 PCYOX1Q9UHG3 505 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 ZNF225Q9UK10 706 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 LSM7Q9UK45 103 aaKnown RBP4.2□□□□□ -1.74
USP54-206ENST00000433394 ING4Q9UNL4 249 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 IFT172Q9UG01 1749 aa4.2□□□□□ -1.74
USP54-206ENST00000433394 ATRXP46100 2492 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 UGGT1Q9NYU2 1555 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 SETBP1Q9Y6X0 1596 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 NRXN1Q9ULB1 1477 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 EIF3AQ14152 1382 aaKnown RBP4.19□□□□□ -1.74
USP54-206ENST00000433394 POLR1AO95602 1720 aaPredicted RBP4.19□□□□□ -1.74
USP54-206ENST00000433394 SERTM2A0A1B0GWG4 89 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 H0YIV9 168 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 PES1O00541 588 aaKnown RBP4.19□□□□□ -1.74
USP54-206ENST00000433394 NDUFAB1O14561 156 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 DNAJB6O75190 326 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 NPIPB7O75200 414 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 TNFSF13O75888 250 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 FGF4P08620 206 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 CT62P0C5K7 136 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 SERPINB5P36952 375 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 UQCRFS1P47985 274 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 RAB9AP51151 201 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 GPNMBQ14956 572 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 FRMPD2BQ6IN97 320 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 REEP3Q6NUK4 255 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 OTUD6AQ7L8S5 288 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 SCD5Q86SK9 330 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 OAFQ86UD1 273 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 MICU2Q8IYU8 434 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 ZADH2Q8N4Q0 377 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 MREGQ8N565 214 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 LINC01555Q8NAE3 123 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 FAM184AQ8NB25 1140 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 SUMF2Q8NBJ7 301 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 ZNF502Q8TBZ5 544 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 AGR3Q8TD06 166 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 P2RX4Q99571 388 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 NRTNQ99748 197 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 AUNIPQ9H7T9 357 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 ANKRA2Q9H9E1 313 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 EML4Q9HC35 981 aaKnown RBP4.19□□□□□ -1.74
USP54-206ENST00000433394 CCL28Q9NRJ3 127 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 HRASLS2Q9NWW9 162 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms