RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 ELFN2Q5R3F8 820 aa13□□□□□ -0.33
HERC3-206ENST00000431413 MICU2Q8IYU8 434 aa13□□□□□ -0.33
HERC3-206ENST00000431413 ICA1LQ8NDH6 482 aa13□□□□□ -0.33
HERC3-206ENST00000431413 MOSPD2Q8NHP6 518 aa13□□□□□ -0.33
HERC3-206ENST00000431413 PRRC1Q96M27 445 aa13□□□□□ -0.33
HERC3-206ENST00000431413 RBP7Q96R05 134 aa13□□□□□ -0.33
HERC3-206ENST00000431413 TXNIPQ9H3M7 391 aa13□□□□□ -0.33
HERC3-206ENST00000431413 HINT3Q9NQE9 182 aaKnown RBP13□□□□□ -0.33
HERC3-206ENST00000431413 MYEF2Q9P2K5 600 aaKnown RBP13□□□□□ -0.33
HERC3-206ENST00000431413 EIF3KQ9UBQ5 218 aaKnown RBP13□□□□□ -0.33
HERC3-206ENST00000431413 IGLV3-9A0A075B6K5 115 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 TFP02787 698 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 TSPAN19P0C672 248 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 SAGP10523 405 aaPredicted RBP12.99□□□□□ -0.33
HERC3-206ENST00000431413 IFI30P13284 250 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 ZNF250P15622 560 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 DRD4P21917 467 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 COL8A2P25067 703 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 DVL1P1P54792 670 aaPredicted RBP12.99□□□□□ -0.33
HERC3-206ENST00000431413 TEKQ02763 1124 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 SF3A3Q12874 501 aaKnown RBP eCLIP12.99□□□□□ -0.33
HERC3-206ENST00000431413 LAPTM4AQ15012 233 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 ANKDD1AQ495B1 522 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 ARMC4Q5T2S8 1044 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 FAM205BPQ63HN1 556 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 GLCCI1Q86VQ1 547 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 ALDH16A1Q8IZ83 802 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 RP9Q8TA86 221 aaKnown RBP12.99□□□□□ -0.33
HERC3-206ENST00000431413 BPIFA2Q96DR5 249 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 C1orf159Q96HA4 380 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 ALG12Q9BV10 488 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 FNDC11Q9BVV2 318 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 OR51B6Q9H340 312 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 HIF3AQ9Y2N7 669 aa12.99□□□□□ -0.33
HERC3-206ENST00000431413 C17orf100A8MU93 164 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 PPIHO43447 177 aaKnown RBP12.98□□□□□ -0.33
HERC3-206ENST00000431413 SLC2A10O95528 541 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 IFNW1P05000 195 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 MMP7P09237 267 aaPredicted RBP12.98□□□□□ -0.33
HERC3-206ENST00000431413 CCNOP22674 350 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 STOMP27105 288 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 GCH1P30793 250 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 RPL27P61353 136 aaKnown RBP12.98□□□□□ -0.33
HERC3-206ENST00000431413 TOP3AQ13472 1001 aaPredicted RBP12.98□□□□□ -0.33
HERC3-206ENST00000431413 SGCAQ16586 387 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 HSP90B2PQ58FF3 399 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 PABPC1L2AQ5JQF8 200 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 THEM4Q5T1C6 240 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 C1orf174Q8IYL3 243 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 PAQR4Q8N4S7 273 aaPredicted RBP12.98□□□□□ -0.33
HERC3-206ENST00000431413 RFLNBQ8N5W9 214 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 NSMAFQ92636 917 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 ZNF275Q9NSD4 429 aaPredicted RBP12.98□□□□□ -0.33
HERC3-206ENST00000431413 NKIRAS2Q9NYR9 191 aa12.98□□□□□ -0.33
HERC3-206ENST00000431413 A6NIZ1 184 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 GSTA4O15217 222 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 TPD52L2O43399 206 aaKnown RBP12.97□□□□□ -0.33
HERC3-206ENST00000431413 CLPTM1O96005 669 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 ZNF32P17041 273 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 CDAP32320 146 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 GDI2P50395 445 aaKnown RBP12.97□□□□□ -0.33
HERC3-206ENST00000431413 RAP1BP61224 184 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 PCBD1P61457 104 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 RAP1AP62834 184 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 CCL8P80075 99 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 SCGB2A2Q13296 93 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 TRAM2Q15035 370 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 ALKBH6Q3KRA9 238 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 KRTAP24-1Q3LI83 254 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 FAM27BQ5VT28 67 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 RRM2BQ7LG56 351 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 RNF113BQ8IZP6 322 aaKnown RBP12.97□□□□□ -0.33
HERC3-206ENST00000431413 OR1J1Q8NGS3 322 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 CLDND2Q8NHS1 167 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 HDAC2Q92769 488 aaKnown RBP12.97□□□□□ -0.33
HERC3-206ENST00000431413 RCN3Q96D15 328 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 NDEL1Q9GZM8 345 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 NARFLQ9H6Q4 476 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 DECR2Q9NUI1 292 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 A4GNTQ9UNA3 340 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 GRIP1Q9Y3R0 1128 aa12.97□□□□□ -0.33
HERC3-206ENST00000431413 PLSCR5A0PG75 271 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 C5orf49A4QMS7 147 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 NDUFAB1O14561 156 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 TCF21O43680 179 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 PIP5K1CO60331 668 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 CCDC22O60826 627 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 NCR1O76036 304 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 ZNF682O95780 498 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 IGHV3-13P01766 116 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 ANPEPP15144 967 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 MAGEB1P43366 347 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 SLC9A3P48764 834 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 CTXN1P60606 82 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 ERVS71-1P61550 626 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 FMODQ06828 376 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 ZNF718Q3SXZ3 478 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 CGB2Q6NT52 195 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 SLC25A47Q6Q0C1 308 aa12.96□□□□□ -0.33
HERC3-206ENST00000431413 ARL9Q6T311 187 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms