RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 C19orf24Q9BVV8 132 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 CHODLQ9H9P2 273 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 KCNS2Q9ULS6 477 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 AURKCQ9UQB9 309 aa11.17□□□□□ -0.62
VRK3-203ENST00000424804 TENM1Q9UKZ4 2725 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 TRBV4-1A0A0J9YWV2 114 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 LYNX1G3V0Z9 82 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 TRMUO75648 421 aaKnown RBP11.16□□□□□ -0.62
VRK3-203ENST00000424804 GADD45GO95257 159 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 SLC2A10O95528 541 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 TGFAP01135 160 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 IGF2P01344 180 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 T-ENOLP0DO92 83 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 LYNX1P0DP58 116 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 DAOP14920 347 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 ACADSP16219 412 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 ZNF14P17017 642 aaPredicted RBP11.16□□□□□ -0.62
VRK3-203ENST00000424804 SRD5A1P18405 259 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 NPR2P20594 1047 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 ATP6V1B2P21281 511 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 NR4A1P22736 598 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 ARR3P36575 388 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 PTDSS1P48651 473 aaKnown RBP11.16□□□□□ -0.62
VRK3-203ENST00000424804 ZNF84P51523 738 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 TRIP10Q15642 601 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 CARTPTQ16568 116 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 CR1LQ2VPA4 569 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 TRPM8Q7Z2W7 1104 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 HDDC2Q7Z4H3 204 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 ZDHHC21Q8IVQ6 265 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 FGFBP3Q8TAT2 258 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 SLC7A13Q8TCU3 470 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 NEU4Q8WWR8 484 aaPredicted RBP11.16□□□□□ -0.62
VRK3-203ENST00000424804 NSMAFQ92636 917 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 CLPTM1LQ96KA5 538 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 C7orf34Q96L11 122 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 THTPAQ9BU02 230 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 RNF121Q9H920 327 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 KRCC1Q9NPI7 259 aaPredicted RBP11.16□□□□□ -0.62
VRK3-203ENST00000424804 ZNF346Q9UL40 294 aaKnown RBP11.16□□□□□ -0.62
VRK3-203ENST00000424804 TMEM5Q9Y2B1 443 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 HIF3AQ9Y2N7 669 aa11.16□□□□□ -0.62
VRK3-203ENST00000424804 CDC42EP2O14613 210 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 DHHO43323 396 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 UBOX5O94941 541 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 RAB36O95755 333 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 PATE4P0C8F1 98 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 RRM2P31350 389 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 SLC9A3P48764 834 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 ERVK-25P63136 954 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 FMODQ06828 376 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 SEC23BQ15437 767 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 FXNQ16595 210 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 GSG1Q2KHT4 349 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 IQCCQ4KMZ1 466 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 ELFN2Q5R3F8 820 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 LRFN4Q6PJG9 635 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 DHFR2Q86XF0 187 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 LRRC18Q8N456 261 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 OR4K5Q8NGD3 323 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 LIPHQ8WWY8 451 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 HDAC2Q92769 488 aaKnown RBP11.15□□□□□ -0.62
VRK3-203ENST00000424804 MCHR2Q969V1 340 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 LRGUKQ96M69 825 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 SH3GL3Q99963 347 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 MRPL37Q9BZE1 423 aaKnown RBP11.15□□□□□ -0.62
VRK3-203ENST00000424804 NDEL1Q9GZM8 345 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 RAB1BQ9H0U4 201 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 TXNIPQ9H3M7 391 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 ANKRD19PQ9H560 264 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 MOV10Q9HCE1 1003 aaKnown RBP11.15□□□□□ -0.62
VRK3-203ENST00000424804 ACTR3BQ9P1U1 418 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 IL20RAQ9UHF4 553 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 TMCC3Q9ULS5 477 aa11.15□□□□□ -0.62
VRK3-203ENST00000424804 A0A1W2PRQ8 180 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 SH3PXD2BA1X283 911 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 HTR3EA5X5Y0 456 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 H7C1C5 153 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 OR10H3O60404 316 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 UBL3O95164 117 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 FARS2O95363 451 aaKnown RBP11.14□□□□□ -0.63
VRK3-203ENST00000424804 ADRA2AP08913 450 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 GIPRP48546 466 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 EVX1P49640 407 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 SMIM11AP58511 58 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 RPL27P61353 136 aaKnown RBP11.14□□□□□ -0.63
VRK3-203ENST00000424804 LCN6P62502 163 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 RAB1AP62820 205 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 DAG1Q14118 895 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 DGCR6Q14129 220 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 TAF11Q15544 211 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 SGCAQ16586 387 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 SPATS1Q496A3 300 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 ZBED5Q49AG3 693 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 ARMC4Q5T2S8 1044 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 KRT80Q6KB66 452 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 TMPRSS11FQ6ZWK6 438 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 LRP11Q86VZ4 500 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 ZNF584Q8IVC4 421 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 SKA3Q8IX90 412 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms