RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 SLC2A10O95528 541 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 MSMBP08118 114 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 CCL2P13500 99 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 COL8A2P25067 703 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 ARFIP2P53365 341 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 UCP2P55851 309 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 CD47Q08722 323 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 ST3GAL3Q11203 375 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 KLF10Q13118 480 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 SCGB2A2Q13296 93 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 ALKBH6Q3KRA9 238 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 CYBRD1Q53TN4 286 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 ALG10Q5BKT4 473 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 FAM205BPQ63HN1 556 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 UNQ6126/PRO20091Q6UXV3 157 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 ARPINQ7Z6K5 226 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 LRRC18Q8N456 261 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 OR2T12Q8NG77 320 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 OR51F2Q8NH61 342 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 MOSPD2Q8NHP6 518 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 FNDC8Q8TC99 324 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 C10orf82Q8WW14 230 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 YIPF5Q969M3 257 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 NMD3Q96D46 503 aaKnown RBP9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 ZNF583Q96ND8 569 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 ALG12Q9BV10 488 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 OR51B6Q9H340 312 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 TXNIPQ9H3M7 391 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 NARFLQ9H6Q4 476 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 SAR1AQ9NR31 198 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 FGFR1OP2Q9NVK5 253 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 HIF3AQ9Y2N7 669 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 AP3M1Q9Y2T2 418 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 GRIP1Q9Y3R0 1128 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 UGT2A1Q9Y4X1 527 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 CAPN7Q9Y6W3 813 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 SLC22A2O15244 555 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 CLPTM1O96005 669 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 IGHMP01871 453 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 GAAP10253 952 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 DRD4P21917 467 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 STOMP27105 288 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 KDELR2P33947 212 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 MAGEB1P43366 347 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 OR1E2P47887 323 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 ERVS71-1P61550 626 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 SRSF2Q01130 221 aaKnown RBP9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 TEKQ02763 1124 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 FMODQ06828 376 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 TOP3AQ13472 1001 aaPredicted RBP9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 PABPC1L2AQ5JQF8 200 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 SHQ1Q6PI26 577 aaKnown RBP9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 MICU2Q8IYU8 434 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 OFCC1Q8IZS5 231 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 ICA1LQ8NDH6 482 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 LZICQ8WZA0 190 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 HDAC2Q92769 488 aaKnown RBP9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 NABP1Q96AH0 204 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 TMEM186Q96B77 213 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 BPIFA2Q96DR5 249 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 TSPAN32Q96QS1 320 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 HIF1ANQ9NWT6 349 aa9.87□□□□□ -0.83
SQSTM1-203ENST00000422245 TRAV20A0A0B4J274 112 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 IGHV1-69-2A0A0G2JMI3 117 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 ELOVL7A1L3X0 281 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 A6NIZ1 184 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 FAM157AC9JC47 383 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 PIP5K1CO60331 668 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 SASH3O75995 380 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 IGHV3-13P01766 116 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 IFNW1P05000 195 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 IFI30P13284 250 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 ZNF32P17041 273 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 CDAP32320 146 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 GDI2P50395 445 aaKnown RBP9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 RAP1BP61224 184 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 RPL27P61353 136 aaKnown RBP9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 PCBD1P61457 104 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 RAP1AP62834 184 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 CCL8P80075 99 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 ANKDD1AQ495B1 522 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 FAM209AQ5JX71 171 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 C1orf174Q8IYL3 243 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 TEX29Q8N6K0 151 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 CPEB3Q8NE35 698 aaKnown RBP9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 OR1J1Q8NGS3 322 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 NSMAFQ92636 917 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 RAB39BQ96DA2 213 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 TPD52L3Q96J77 140 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 POM121L2Q96KW2 1035 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 SAP30LQ9HAJ7 183 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 DECR2Q9NUI1 292 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 TREM2Q9NZC2 230 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 EIF3KQ9UBQ5 218 aaKnown RBP9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 METRNQ9UJH8 293 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 A4GNTQ9UNA3 340 aa9.86□□□□□ -0.83
SQSTM1-203ENST00000422245 A0A0A6YYJ9 748 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 IGKV1D-43A0A0B4J1Z2 117 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 LOC100653049A0A140TA62 436 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 C5orf49A4QMS7 147 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms