RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 RAP1AP62834 184 aa13.46□□□□□ -0.25
ITGB1-204ENST00000417122 MXRA7P84157 204 aa13.46□□□□□ -0.25
ITGB1-204ENST00000417122 VLDLRP98155 873 aa13.46□□□□□ -0.25
ITGB1-204ENST00000417122 PLP2Q04941 152 aa13.46□□□□□ -0.25
ITGB1-204ENST00000417122 KRT72Q14CN4 511 aa13.46□□□□□ -0.25
ITGB1-204ENST00000417122 SGCAQ16586 387 aa13.46□□□□□ -0.25
ITGB1-204ENST00000417122 FGD3Q5JSP0 725 aa13.46□□□□□ -0.25
ITGB1-204ENST00000417122 C16orf89Q6UX73 402 aa13.46□□□□□ -0.25
ITGB1-204ENST00000417122 CLDN22Q8N7P3 220 aa13.46□□□□□ -0.25
ITGB1-204ENST00000417122 NABP1Q96AH0 204 aa13.46□□□□□ -0.25
ITGB1-204ENST00000417122 FAM46AQ96IP4 442 aaKnown RBP13.46□□□□□ -0.25
ITGB1-204ENST00000417122 PIMREGQ9BSJ6 248 aa13.46□□□□□ -0.25
ITGB1-204ENST00000417122 CDH20Q9HBT6 801 aa13.46□□□□□ -0.25
ITGB1-204ENST00000417122 V9GYQ6 96 aa13.46□□□□□ -0.25
ITGB1-204ENST00000417122 CHD3Q12873 2000 aaKnown RBP13.46□□□□□ -0.26
ITGB1-204ENST00000417122 YLPM1P49750 1951 aaKnown RBP13.45□□□□□ -0.26
ITGB1-204ENST00000417122 LOC390937A0A1W2PQ73 354 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 SLC22A23A1A5C7 686 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 TLX2O43763 284 aaPredicted RBP13.45□□□□□ -0.26
ITGB1-204ENST00000417122 CD14P08571 375 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 ADRA2AP08913 450 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 ITGA2P17301 1181 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 MSX2P35548 267 aaPredicted RBP13.45□□□□□ -0.26
ITGB1-204ENST00000417122 ERVK-25P63136 954 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 HSF2Q03933 536 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 CARTPTQ16568 116 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 TBC1D28Q2M2D7 210 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 TMEM249Q2WGJ8 235 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 DEFB107AQ8IZN7 70 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 PAQR4Q8N4S7 273 aaPredicted RBP13.45□□□□□ -0.26
ITGB1-204ENST00000417122 ARIH2OSQ8N7S6 290 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 OR1J2Q8NGS2 313 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 NEU4Q8WWR8 484 aaPredicted RBP13.45□□□□□ -0.26
ITGB1-204ENST00000417122 PYURFQ96I23 114 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 SYT3Q9BQG1 590 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 NDEL1Q9GZM8 345 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 CCNB1IP1Q9NPC3 277 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 NDE1Q9NXR1 346 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 GRHPRQ9UBQ7 328 aa13.45□□□□□ -0.26
ITGB1-204ENST00000417122 TRBV4-1A0A0J9YWV2 114 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 VWC2LB2RUY7 222 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 ARPC2O15144 300 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 SYNGR3O43761 229 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 SNAP29O95721 258 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 SEMG1P04279 462 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 IGFBP1P08833 259 aaPredicted RBP13.44□□□□□ -0.26
ITGB1-204ENST00000417122 FAM157BP0CG42 384 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 ZNF26P17031 533 aaPredicted RBP13.44□□□□□ -0.26
ITGB1-204ENST00000417122 ZNF32P17041 273 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 USF1P22415 310 aaPredicted RBP13.44□□□□□ -0.26
ITGB1-204ENST00000417122 APLNRP35414 380 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 GUCA1AP43080 201 aaPredicted RBP13.44□□□□□ -0.26
ITGB1-204ENST00000417122 OMPP47874 163 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 LIMS1P48059 325 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 IQCCQ4KMZ1 466 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 PABPC1L2AQ5JQF8 200 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 FAM27BQ5VT28 67 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 RGS7BPQ6MZT1 257 aaPredicted RBP13.44□□□□□ -0.26
ITGB1-204ENST00000417122 LRP11Q86VZ4 500 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 OR52J3Q8NH60 311 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 DHRS1Q96LJ7 313 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 NSMCE2Q96MF7 247 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 FOXN4Q96NZ1 517 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 CCT8L2Q96SF2 557 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 LRMDAQ9H2I8 198 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 TPK1Q9H3S4 243 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 KRCC1Q9NPI7 259 aaPredicted RBP13.44□□□□□ -0.26
ITGB1-204ENST00000417122 YAE1D1Q9NRH1 226 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 REV1Q9UBZ9 1251 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 DUSP13Q9UII6 198 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 FZR1Q9UM11 496 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 AURKCQ9UQB9 309 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 SIGLEC7Q9Y286 467 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 ADAM18Q9Y3Q7 739 aa13.44□□□□□ -0.26
ITGB1-204ENST00000417122 FN1P02751 2386 aaKnown RBP13.44□□□□□ -0.26
ITGB1-204ENST00000417122 A0A1W2PPL8 197 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 H7C1C5 153 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 M0R233 179 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 DYNC1I1O14576 645 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 XKRYO14609 159 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 PTP4A3O75365 173 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 CRLF1O75462 422 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 NDUFB2O95178 105 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 DAOP14920 347 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 APEX1P27695 318 aaKnown RBP13.43□□□□□ -0.26
ITGB1-204ENST00000417122 LAP3P28838 519 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 NR4A2P43354 598 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 LCN6P62502 163 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 GGTLC2Q14390 218 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 SEC23BQ15437 767 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 SPATS1Q496A3 300 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 MESTQ5EB52 335 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 FOXL2NBQ6ZUU3 175 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 FAM122BQ7Z309 247 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 FITM2Q8N6M3 262 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 CPEB3Q8NE35 698 aaKnown RBP13.43□□□□□ -0.26
ITGB1-204ENST00000417122 MCUR1Q96AQ8 359 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 Q96M85 177 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 ZNF570Q96NI8 536 aa13.43□□□□□ -0.26
ITGB1-204ENST00000417122 BCL2L14Q9BZR8 327 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms