RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 IFT46Q9NQC8 304 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 ABCC13Q9NSE7 274 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 B3GNT2Q9NY97 397 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 C19orf25Q9UFG5 118 aaPredicted RBP2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 LGALS13Q9UHV8 139 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 LSM7Q9UK45 103 aaKnown RBP2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 FBXO5Q9UKT4 447 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 NDRG2Q9UN36 371 aaKnown RBP2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 SAMD4AQ9UPU9 718 aaKnown RBP2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 TCF19Q9Y242 345 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 ACOT9Q9Y305 439 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 SNX24Q9Y343 169 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 RPL36Q9Y3U8 105 aaKnown RBP2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 CHST2Q9Y4C5 530 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 OR51B4Q9Y5P0 310 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 SNX10Q9Y5X0 201 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 NUBP2Q9Y5Y2 271 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 R4GN57 208 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 CCNB3Q8WWL7 1395 aa2.73□□□□□ -1.97
CTDSPL-203ENST00000416688 SNAPC4Q5SXM2 1469 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 A0A0B4J2E0 115 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 A0A0G2JLL6 359 aaPredicted RBP2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 KIR2DL5BA0A0G2JN68 375 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 KIR2DL5BA0A0G2JPC4 375 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 A0A1B0GU03 582 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 A0A1B0GX12 115 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 FAM231BA6NCW3 169 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 LILRA5A6NI73 299 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 METTL15A6NJ78 407 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 OR5B21A6NL26 309 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 LYRM9A8MSI8 78 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 OR11H12B2RN74 326 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 VWC2LB2RUY7 222 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 IDSB3KWA1 339 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 F8W036 122 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 TMEM178BH3BS89 294 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 PRRG2O14669 202 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 UBDO15205 165 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 TM9SF1O15321 606 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 MPPED1O15442 326 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 NUPL2O15504 423 aaKnown RBP2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 PHF1O43189 567 aaPredicted RBP2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 MLNRO43193 412 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 FGF16O43320 207 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 LAMTOR5O43504 91 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 CLDN11O75508 207 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 KHDRBS3O75525 346 aaKnown RBP2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 EEDO75530 441 aaKnown RBP2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 OR7A10O76100 309 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 CNIH1O95406 144 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 TDP2O95551 362 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 C1orf105O95561 183 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 CD74P04233 296 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 WNT1P04628 370 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 UMODP07911 640 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 SP1P08047 785 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 WNT2P09544 360 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 LIMS3P0CW19 117 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 LIMS4P0CW20 117 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 COX4I1P13073 169 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 IFI30P13284 250 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 TBPP20226 339 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 COX5AP20674 150 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 SERPINA2P20848 420 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 IDSP22304 550 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 ACRV1P26436 265 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 HTR1DP28221 377 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 SSTR2P30874 369 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 HTR1FP30939 366 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 RPA3P35244 121 aaPredicted RBP2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 DCTP40126 519 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 CD96P40200 585 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 ERFP50548 548 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 HLCSP50747 726 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 SSR4P51571 173 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 LBX1P52954 281 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 FGF8P55075 233 aaPredicted RBP2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 FBXW4P57775 412 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 ABCE1P61221 599 aaKnown RBP2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 STXBP1P61764 594 aaKnown RBP2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 SRSF3P84103 164 aaKnown RBP2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 ST3GAL4Q11206 333 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 FOXL1Q12952 345 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 GAGE1Q13065 139 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 UNC119Q13432 240 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 TFDP2Q14188 446 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 ZNF268Q14587 947 aaPredicted RBP2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 DUSP7Q16829 419 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 RSPO4Q2I0M5 234 aaPredicted RBP2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 TBC1D28Q2M2D7 210 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 DEFB115Q30KQ5 88 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 CPTPQ5TA50 214 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 SAXO2Q658L1 398 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 TMEM42Q69YG0 159 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 OR8G2PQ6IF36 304 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 PWWP2BQ6NUJ5 590 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 RWDD4Q6NW29 188 aaKnown RBP2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 MED27Q6P2C8 311 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 ZFP1Q6P2D0 407 aa2.72□□□□□ -1.97
CTDSPL-203ENST00000416688 ATRAIDQ6UW56 229 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms