RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 ANKRD16Q6P6B7 361 aa13.36□□□□□ -0.27
LSM5-207ENST00000410044 GLB1L2Q8IW92 636 aa13.36□□□□□ -0.27
LSM5-207ENST00000410044 OR1K1Q8NGR3 316 aa13.36□□□□□ -0.27
LSM5-207ENST00000410044 FBLIM1Q8WUP2 373 aa13.36□□□□□ -0.27
LSM5-207ENST00000410044 ZNRF4Q8WWF5 429 aa13.36□□□□□ -0.27
LSM5-207ENST00000410044 ZNF184Q99676 751 aaPredicted RBP13.36□□□□□ -0.27
LSM5-207ENST00000410044 MARCH7Q9H992 704 aa13.36□□□□□ -0.27
LSM5-207ENST00000410044 GALNT8Q9NY28 637 aa13.36□□□□□ -0.27
LSM5-207ENST00000410044 COA3Q9Y2R0 106 aaPredicted RBP13.36□□□□□ -0.27
LSM5-207ENST00000410044 NKX2-6A6NCS4 301 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 FAM90A27PA6NNH2 459 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 C16orf97H3BN30 126 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 GLCEO94923 617 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 CLIC3O95833 236 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 HRGP04196 525 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 CLUP10909 449 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 TEKQ02763 1124 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 HSF2Q03933 536 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 GLO1Q04760 184 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 MAD2L1BPQ15013 274 aaPredicted RBP13.35□□□□□ -0.27
LSM5-207ENST00000410044 C6orf52Q5T4I8 152 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 FAM27BQ5VT28 67 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 MEPCEQ7L2J0 689 aaKnown RBP13.35□□□□□ -0.27
LSM5-207ENST00000410044 P2RY8Q86VZ1 359 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 CCDC36Q8IYA8 594 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 C17orf78Q8N4C9 275 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 STEAP2Q8NFT2 490 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 OR9Q1Q8NGQ5 310 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 SSC4DQ8WTU2 575 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 NSMAFQ92636 917 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 KISS1RQ969F8 398 aaPredicted RBP13.35□□□□□ -0.27
LSM5-207ENST00000410044 NABP1Q96AH0 204 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 TEAD3Q99594 435 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 WACQ9BTA9 647 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 ANKRD60Q9BZ19 345 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 NELFAQ9H3P2 528 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 MED20Q9H944 212 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 SIAEQ9HAT2 523 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 HAO2Q9NYQ3 351 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 H2AFY2Q9P0M6 372 aaPredicted RBP13.35□□□□□ -0.27
LSM5-207ENST00000410044 CACNA1CQ13936 2221 aa13.35□□□□□ -0.27
LSM5-207ENST00000410044 RELNP78509 3460 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 CIB4A0PJX0 185 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 CCDC182A6NF36 153 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 M0R129 80 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 DENRO43583 198 aaKnown RBP13.34□□□□□ -0.27
LSM5-207ENST00000410044 LYZL6O75951 148 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 GNAO1P09471 354 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 OR8G3PP0DMU2 310 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 GAAP10253 952 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 MYF6P23409 242 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 PAX7P23759 505 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 UGT2B10P36537 528 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 GUCA1AP43080 201 aaPredicted RBP13.34□□□□□ -0.27
LSM5-207ENST00000410044 LSM6P62312 80 aaKnown RBP13.34□□□□□ -0.27
LSM5-207ENST00000410044 SORDQ00796 357 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 BHLHA15Q7RTS1 189 aaPredicted RBP13.34□□□□□ -0.27
LSM5-207ENST00000410044 THAP5Q7Z6K1 395 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 GID4Q8IVV7 300 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 C8orf59Q8N0T1 100 aaPredicted RBP13.34□□□□□ -0.27
LSM5-207ENST00000410044 SLC22A24Q8N4F4 322 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 SLC26A10Q8NG04 563 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 Q96MT0 163 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 ZNF582Q96NG8 517 aaPredicted RBP13.34□□□□□ -0.27
LSM5-207ENST00000410044 OR51V1Q9H2C8 321 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 OBP2BQ9NPH6 170 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 POLE4Q9NR33 117 aa13.34□□□□□ -0.27
LSM5-207ENST00000410044 KLF2Q9Y5W3 355 aaPredicted RBP13.34□□□□□ -0.27
LSM5-207ENST00000410044 ARPC4-TTLL3A0A0A6YYG9 625 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 SLC22A31A6NKX4 558 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 WBP4O75554 376 aaKnown RBP13.33□□□□□ -0.28
LSM5-207ENST00000410044 TFP02787 698 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 SCG5P05408 212 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 GYPBP06028 91 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 RNF224P0DH78 156 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 PPP3CBP16298 524 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 HTR1FP30939 366 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 FMO3P31513 532 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 CDAP32320 146 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 PYCR1P32322 319 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 IL5RAQ01344 420 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 APOFQ13790 326 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 PCK2Q16822 640 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 TBRG1Q3YBR2 411 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 TEX30Q5JUR7 227 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 TIMM23BQ5SRD1 257 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 C9orf135Q5VTT2 229 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 ZNF813Q6ZN06 617 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 SSX8Q7RTT4 187 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 BCDIN3DQ7Z5W3 292 aaKnown RBP13.33□□□□□ -0.28
LSM5-207ENST00000410044 DPPA2Q7Z7J5 298 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 SYT9Q86SS6 491 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 WDR31Q8NA23 367 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 PROKR2Q8NFJ6 384 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 BBS1Q8NFJ9 593 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 APH1BQ8WW43 257 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 RFKQ969G6 155 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 RERGLQ9H628 205 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 SEC61A2Q9H9S3 476 aa13.33□□□□□ -0.28
LSM5-207ENST00000410044 SLC17A5Q9NRA2 495 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms