RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SKA3Q8IX90 412 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 FBXL14Q8N1E6 418 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 PAPD5Q8NDF8 572 aaKnown RBP9.49□□□□□ -0.89
CHMP3-205ENST00000409810 OR4F15Q8NGB8 312 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 LILRB1Q8NHL6 650 aaPredicted RBP9.49□□□□□ -0.89
CHMP3-205ENST00000409810 SMAP2Q8WU79 429 aaPredicted RBP9.49□□□□□ -0.89
CHMP3-205ENST00000409810 NEUROG1Q92886 237 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 NMD3Q96D46 503 aaKnown RBP9.49□□□□□ -0.89
CHMP3-205ENST00000409810 SAMD8Q96LT4 415 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 ERMAPQ96PL5 475 aaPredicted RBP9.49□□□□□ -0.89
CHMP3-205ENST00000409810 SNX18Q96RF0 628 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 SH3GL3Q99963 347 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 DHRS9Q9BPW9 319 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 C1orf198Q9H425 327 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 SEC61A2Q9H9S3 476 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 ZNF556Q9HAH1 456 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 CCNB1IP1Q9NPC3 277 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 VNN3Q9NY84 501 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 B3GNT2Q9NY97 397 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 VSX1Q9NZR4 365 aaPredicted RBP9.49□□□□□ -0.89
CHMP3-205ENST00000409810 PDP1Q9P0J1 537 aaPredicted RBP9.49□□□□□ -0.89
CHMP3-205ENST00000409810 BAIAP2Q9UQB8 552 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 IGKV1D-43A0A0B4J1Z2 117 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 IQCMA0A1B0GVH7 501 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 A0A1W2PPL8 197 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 ZNF503-AS2A6NEH8 195 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 VSTM5A8MXK1 200 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 ATP6V1G2-DDX39BF2Z307 99 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 H7C1C5 153 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 KHDRBS3O75525 346 aaKnown RBP9.48□□□□□ -0.89
CHMP3-205ENST00000409810 CELA3BP08861 270 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 MSR1P21757 451 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 CRABP1P29762 137 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 ERFP50548 548 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 FABP6P51161 128 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 LCN6P62502 163 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 GALK2Q01415 458 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 HSF2Q03933 536 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 PLP2Q04941 152 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 PIGFQ07326 219 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 COX10Q12887 443 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 SGCAQ16586 387 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 LRRC75A-AS1Q8N1F1 130 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 LRRC18Q8N456 261 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 GTPBP3Q969Y2 492 aaKnown RBP9.48□□□□□ -0.89
CHMP3-205ENST00000409810 WACQ9BTA9 647 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 SYT4Q9H2B2 425 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 TBC1D23Q9NUY8 699 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 IL20Q9NYY1 176 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 ZNF224Q9NZL3 707 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 MOKQ9UQ07 419 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 LAMP3Q9UQV4 416 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 SPEF1Q9Y4P9 236 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 UGT2A1Q9Y4X1 527 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 RTTNQ86VV8 2226 aa9.48□□□□□ -0.89
CHMP3-205ENST00000409810 ARFGEF3Q5TH69 2177 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 IGHV2OR16-5A0A0B4J2B6 119 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 E7EQL1 145 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 SERPINA5P05154 406 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 CST2P09228 141 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 BMP4P12644 408 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 ANXA8P13928 327 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 CTLA4P16410 223 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 ZNF14P17017 642 aaPredicted RBP9.47□□□□□ -0.89
CHMP3-205ENST00000409810 FASP25445 335 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 APOBEC3AP31941 199 aaPredicted RBP9.47□□□□□ -0.89
CHMP3-205ENST00000409810 CDAP32320 146 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 TTKP33981 857 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 PCBD1P61457 104 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 TBC1D28Q2M2D7 210 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 CLEC12AQ5QGZ9 265 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 FAM27BQ5VT28 67 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 LEG1Q6P5S2 330 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 SHQ1Q6PI26 577 aaKnown RBP9.47□□□□□ -0.89
CHMP3-205ENST00000409810 CD300LDQ6UXZ3 194 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 FOXL2NBQ6ZUU3 175 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 PTCHD4Q6ZW05 846 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 DTX2Q86UW9 622 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 C10orf67Q8IYJ2 551 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 MUC15Q8N387 334 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 NUP37Q8NFH4 326 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 OR2T33Q8NG76 320 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 OR1J2Q8NGS2 313 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 OR4K13Q8NH42 304 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 TEX47Q8TBZ9 253 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 DNAJC9Q8WXX5 260 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 NABP1Q96AH0 204 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 SLCO4A1Q96BD0 722 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 NRBF2Q96F24 287 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 TRMT61AQ96FX7 289 aaKnown RBP9.47□□□□□ -0.89
CHMP3-205ENST00000409810 RAB3IPQ96QF0 476 aaPredicted RBP9.47□□□□□ -0.89
CHMP3-205ENST00000409810 BDH2Q9BUT1 245 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 GRIP2Q9C0E4 1043 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 CXXC4Q9H2H0 198 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 EGLN3Q9H6Z9 239 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 NOX3Q9HBY0 568 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 CBLN4Q9NTU7 201 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 ARMC1Q9NVT9 282 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 KIF17Q9P2E2 1029 aa9.47□□□□□ -0.89
CHMP3-205ENST00000409810 C12orf71A8MTZ7 269 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms