RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 CDNFQ49AH0 187 aa12.97□□□□□ -0.33
CLIP2-203ENST00000395060 WDR38Q5JTN6 314 aa12.97□□□□□ -0.33
CLIP2-203ENST00000395060 JMJD6Q6NYC1 403 aaPredicted RBP12.97□□□□□ -0.33
CLIP2-203ENST00000395060 TMPPEQ6ZT21 453 aa12.97□□□□□ -0.33
CLIP2-203ENST00000395060 FOXRED2Q8IWF2 684 aa12.97□□□□□ -0.33
CLIP2-203ENST00000395060 TMED6Q8WW62 240 aa12.97□□□□□ -0.33
CLIP2-203ENST00000395060 SLC6A7Q99884 636 aa12.97□□□□□ -0.33
CLIP2-203ENST00000395060 MED9Q9NWA0 146 aa12.97□□□□□ -0.33
CLIP2-203ENST00000395060 PURGQ9UJV8 347 aaKnown RBP12.97□□□□□ -0.33
CLIP2-203ENST00000395060 PTPRSQ13332 1948 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 OR14I1A6ND48 311 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 APBB3O95704 486 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 HNRNPA1P09651 372 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLIP2-203ENST00000395060 MAP3K8P41279 467 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 PPIAP62937 165 aaKnown RBP12.96□□□□□ -0.33
CLIP2-203ENST00000395060 EIF2B5Q13144 721 aaKnown RBP12.96□□□□□ -0.33
CLIP2-203ENST00000395060 SNTB1Q13884 538 aaKnown RBP12.96□□□□□ -0.33
CLIP2-203ENST00000395060 DPY19L2P2Q6ZN68 376 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 MARCH3Q86UD3 253 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 MCATQ8IVS2 390 aaKnown RBP12.96□□□□□ -0.33
CLIP2-203ENST00000395060 PRR22Q8IZ63 422 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 GPR148Q8TDV2 347 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 KXD1Q9BQD3 176 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 CCDC3Q9BQI4 270 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 CRB3Q9BUF7 120 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 ELOVL3Q9HB03 270 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 MBD2Q9UBB5 411 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 GRHPRQ9UBQ7 328 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 COLEC10Q9Y6Z7 277 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 EML5Q05BV3 1969 aa12.96□□□□□ -0.33
CLIP2-203ENST00000395060 WDPCPO95876 746 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 WNT11O96014 354 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 GP1BAP07359 652 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 SPARCP09486 303 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 ST6GAL1P15907 406 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 LSSP48449 732 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 MRPS10P82664 201 aaKnown RBP12.96□□□□□ -0.34
CLIP2-203ENST00000395060 ZNHIT3Q15649 155 aaPredicted RBP12.96□□□□□ -0.34
CLIP2-203ENST00000395060 RAB11BQ15907 218 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 ATPAF1Q5TC12 328 aaPredicted RBP12.96□□□□□ -0.34
CLIP2-203ENST00000395060 GLT8D1Q68CQ7 371 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 H3F3CQ6NXT2 135 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 ANKRD16Q6P6B7 361 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 PHOSPHO1Q8TCT1 267 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 ZBTB8AQ96BR9 441 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 MRPL48Q96GC5 212 aaKnown RBP12.96□□□□□ -0.34
CLIP2-203ENST00000395060 SELENOIQ9C0D9 397 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 TLNRD1Q9H1K6 362 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 SLC25A32Q9H2D1 315 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 MSRAQ9UJ68 235 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 TICRRQ7Z2Z1 1910 aa12.96□□□□□ -0.34
CLIP2-203ENST00000395060 OR4C45A6NMZ5 311 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 AQP8O94778 261 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 ACTL6AO96019 429 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 CYB5AP00167 134 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 UBBP0CG47 229 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 UBCP0CG48 685 aaKnown RBP12.95□□□□□ -0.34
CLIP2-203ENST00000395060 SPP1P10451 314 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 NPBWR1P48145 328 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 RPS27AP62979 156 aaKnown RBP12.95□□□□□ -0.34
CLIP2-203ENST00000395060 UBA52P62987 128 aaKnown RBP12.95□□□□□ -0.34
CLIP2-203ENST00000395060 CXADRP78310 365 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 GPM6BQ13491 265 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 PABPC1L2AQ5JQF8 200 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 C1QL3Q5VWW1 255 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 ETV3LQ6ZN32 361 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 KDM8Q8N371 416 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 EID2Q8N6I1 236 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 CLEC1AQ8NC01 280 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 ZNF524Q96C55 264 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 SLC17A9Q9BYT1 436 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 HRH4Q9H3N8 390 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 SCPEP1Q9HB40 452 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 BARX1Q9HBU1 254 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-203ENST00000395060 FANCFQ9NPI8 374 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 SLC27A6Q9Y2P4 619 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 TMED7Q9Y3B3 224 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 LMX1BO60663 402 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 HPGDP15428 266 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 PI3P19957 117 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 BTG2P78543 158 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 GAB4Q2WGN9 574 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 SLC16A13Q7RTY0 426 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 OR1E3Q8WZA6 343 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 RBM18Q96H35 190 aaKnown RBP12.95□□□□□ -0.34
CLIP2-203ENST00000395060 ASB16Q96NS5 453 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 TAS2R4Q9NYW5 299 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 ATXN7L1Q9ULK2 861 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-203ENST00000395060 EDARQ9UNE0 448 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 SPACA6W5XKT8 324 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 LTBP2Q14767 1821 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 TO15178 435 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 NUDT14O95848 222 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 PNPP00491 289 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 PGAM2P15259 253 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 MAPK3P27361 379 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-203ENST00000395060 CALCRP30988 508 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 KIR3DL2P43630 455 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 PRKXP51817 358 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 ADAM8P78325 824 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms