RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 AZGP1P25311 298 aaKnown RBP22.51■■□□□ 1.19
SHOX2-201ENST00000389589 CYB561P49447 251 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 PCK2Q16822 640 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 Q499Y3 187 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 PYDC2Q56P42 97 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 ZNF544Q6NX49 715 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 KRT77Q7Z794 578 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 GPAT4Q86UL3 456 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 LRRC28Q86X40 367 aaPredicted RBP22.51■■□□□ 1.19
SHOX2-201ENST00000389589 WDFY1Q8IWB7 410 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 RNF128Q8TEB7 428 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 PSMF1Q92530 271 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 SLC25A44Q96H78 314 aaPredicted RBP22.51■■□□□ 1.19
SHOX2-201ENST00000389589 THOC3Q96J01 351 aaKnown RBP22.51■■□□□ 1.19
SHOX2-201ENST00000389589 DERL3Q96Q80 235 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 EMC6Q9BV81 110 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 TIGARQ9NQ88 270 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 ANKRD10Q9NXR5 420 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 A0A0C4DFX4 3053 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 ARPC4-TTLL3A0A0A6YYG9 625 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 ANKRD61A6NGH8 418 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 EIF1BO60739 113 aaKnown RBP22.51■■□□□ 1.19
SHOX2-201ENST00000389589 APOA1P02647 267 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 ZNF43P17038 809 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 SRMP19623 302 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 SRD5A2P31213 254 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 CCR9P51686 369 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 LRRN1Q6UXK5 716 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 BEST3Q8N1M1 668 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 OR6X1Q8NH79 312 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 ABHD6Q9BV23 337 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 TEKT2Q9UIF3 430 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 KIAA1549Q9HCM3 1950 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 CACNA1CQ13936 2221 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 LOC101059948A0A1B0GTJ6 334 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 GJE1A6NN92 205 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 DNASE1L1P49184 302 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 CLRN1P58418 232 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 RAC1P63000 192 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 SCN1BQ07699 218 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 RIN1Q13671 783 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 BAK1Q16611 211 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 CEP78Q5JTW2 689 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 GLB1L2Q8IW92 636 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 NOXO1Q8NFA2 376 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 OR52N5Q8NH56 324 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 THRSPQ92748 146 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 C4orf45Q96LM5 186 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 IP6K3Q96PC2 410 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 ABRACLQ9P1F3 81 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 TRBV5-5A0A0J9YX44 114 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 FAM25AB3EWG3 89 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 FAM25CB3EWG5 89 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 FAM25GB3EWG6 89 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 APEX1P27695 318 aaKnown RBP22.5■■□□□ 1.19
SHOX2-201ENST00000389589 RIDAP52758 137 aaKnown RBP22.5■■□□□ 1.19
SHOX2-201ENST00000389589 SLC25A35Q3KQZ1 300 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 ZNF676Q8N7Q3 588 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 PPP1R3EQ9H7J1 279 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 PARD6AQ9NPB6 346 aa22.5■■□□□ 1.19
SHOX2-201ENST00000389589 AHCTF1Q8WYP5 2266 aa22.49■■□□□ 1.19
SHOX2-201ENST00000389589 PIN1P1O15428 100 aa22.49■■□□□ 1.19
SHOX2-201ENST00000389589 TMEM127O75204 238 aa22.49■■□□□ 1.19
SHOX2-201ENST00000389589 MPZL1O95297 269 aa22.49■■□□□ 1.19
SHOX2-201ENST00000389589 PGA4P0DJD7 388 aa22.49■■□□□ 1.19
SHOX2-201ENST00000389589 PGA3P0DJD8 388 aa22.49■■□□□ 1.19
SHOX2-201ENST00000389589 EPXP11678 715 aa22.49■■□□□ 1.19
SHOX2-201ENST00000389589 CSNK2A1P68400 391 aaPredicted RBP22.49■■□□□ 1.19
SHOX2-201ENST00000389589 H3F3AP84243 136 aa22.49■■□□□ 1.19
SHOX2-201ENST00000389589 ADAMTS17Q8TE56 1095 aa22.49■■□□□ 1.19
SHOX2-201ENST00000389589 NAA11Q9BSU3 229 aaPredicted RBP22.49■■□□□ 1.19
SHOX2-201ENST00000389589 STMN3Q9NZ72 180 aa22.49■■□□□ 1.19
SHOX2-201ENST00000389589 CFAP54Q96N23 3096 aa22.49■■□□□ 1.19
SHOX2-201ENST00000389589 ACOD1A6NK06 481 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 ZNF814B7Z6K7 855 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 ZNF254O75437 659 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 ELK1P19419 428 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 OTPQ5XKR4 325 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 PRSS35Q8N3Z0 413 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.48■■□□□ 1.19
SHOX2-201ENST00000389589 SLITRK2Q9H156 845 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 CYSLTR2Q9NS75 346 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 IGKV1D-43A0A0B4J1Z2 117 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 VAMP5O95183 116 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 TALDO1P37837 337 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 IL18Q14116 193 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 TRMT10AQ8TBZ6 339 aaKnown RBP22.48■■□□□ 1.19
SHOX2-201ENST00000389589 GPR148Q8TDV2 347 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 TBC1D24Q9ULP9 559 aa22.48■■□□□ 1.19
SHOX2-201ENST00000389589 MRPS18BQ9Y676 258 aaKnown RBP22.48■■□□□ 1.19
SHOX2-201ENST00000389589 MED12Q93074 2177 aa22.47■■□□□ 1.19
SHOX2-201ENST00000389589 RAF1P04049 648 aa22.47■■□□□ 1.19
SHOX2-201ENST00000389589 CSF3P09919 207 aa22.47■■□□□ 1.19
SHOX2-201ENST00000389589 GPR85P60893 370 aa22.47■■□□□ 1.19
SHOX2-201ENST00000389589 OC90Q02509 493 aaPredicted RBP22.47■■□□□ 1.19
SHOX2-201ENST00000389589 CAMK2DQ13557 499 aa22.47■■□□□ 1.19
SHOX2-201ENST00000389589 TOMM20Q15388 145 aa22.47■■□□□ 1.19
SHOX2-201ENST00000389589 AGAP7PQ5VUJ5 663 aa22.47■■□□□ 1.19
SHOX2-201ENST00000389589 DEGS2Q6QHC5 323 aa22.47■■□□□ 1.19
SHOX2-201ENST00000389589 ZNF227Q86WZ6 799 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms