RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 OR2T27Q8NH04 317 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 SMIM4Q8WVI0 70 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 DEDD2Q8WXF8 326 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 LMF1Q96S06 567 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 CCNL2Q96S94 520 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-202ENST00000379996 TEX12Q9BXU0 123 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 UBQLN4Q9NRR5 601 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 MRPL39Q9NYK5 338 aaKnown RBP6.94□□□□□ -1.3
CDKL5-202ENST00000379996 SLC13A4Q9UKG4 626 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 SPATA2Q9UM82 520 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 MPDZO75970 2070 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 FAM240BA0A1B0GVZ2 78 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 RPS10-NUDT3A0A1W2PQS6 291 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 FAM25AB3EWG3 89 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 FAM25CB3EWG5 89 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 FAM25GB3EWG6 89 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 TMEM127O75204 238 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 ZNF3P17036 446 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 SUMO3P55854 103 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-202ENST00000379996 DYRK1AQ13627 763 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 BTBD16Q32M84 506 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 ARL9Q6T311 187 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 OPN5Q6U736 354 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 LYPD4Q6UWN0 246 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 OR10H4Q8NGA5 316 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 OMA1Q96E52 524 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 RASL10BQ96S79 203 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 IFT27Q9BW83 186 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 DEFB126Q9BYW3 111 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 NANSQ9NR45 359 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 NUBP2Q9Y5Y2 271 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 MRPS18BQ9Y676 258 aaKnown RBP6.94□□□□□ -1.3
CDKL5-202ENST00000379996 SPTBP11277 2137 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 GVINP1Q7Z2Y8 2422 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 MEIKINA0A087WXM9 373 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 LINC00862A6NCI5 91 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 OR6C68A6NDL8 312 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 A8MUA0 341 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 VSTM5A8MXK1 200 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 UPK3AO75631 287 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 GATBO75879 557 aaKnown RBP6.93□□□□□ -1.3
CDKL5-202ENST00000379996 TXNDC12O95881 172 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 TCRBP04435 133 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 GYPBP06028 91 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 CD37P11049 281 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 RAB3BP20337 219 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 UQCRC1P31930 480 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 OTX2P32243 289 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 IFNA8P32881 189 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 DIO1P49895 249 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 PER3P56645 1201 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 FOXL2P58012 376 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 MAB21L1Q13394 359 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 ST3GAL2Q16842 350 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 SLC35D3Q5M8T2 416 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 ZBTB37Q5TC79 503 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 RTL4Q6ZR62 310 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 RRM2BQ7LG56 351 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 SIAH3Q8IW03 269 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 CADM2Q8N3J6 435 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 MS4A15Q8N5U1 240 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 LRRC17Q8N6Y2 441 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 CYB561A3Q8NBI2 242 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 PAQR8Q8TEZ7 354 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 OTULINQ96BN8 352 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 MESP1Q9BRJ9 268 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 C12orf10Q9HB07 376 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-202ENST00000379996 CAMK2AQ9UQM7 478 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 DMXL1Q9Y485 3027 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 TRBV5-5A0A0J9YX44 114 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 LEUTXA8MZ59 168 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 ZNF593O00488 134 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-202ENST00000379996 MAGEB4O15481 346 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-202ENST00000379996 EIF4E2O60573 245 aaKnown RBP6.93□□□□□ -1.3
CDKL5-202ENST00000379996 PTH2RP49190 550 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 P2RX3P56373 397 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 ACTA2P62736 377 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 ACTG2P63267 376 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 PLCXD2Q0VAA5 305 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 CAMK2DQ13557 499 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 ZNF767PQ75MW2 155 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 SPACA9Q96E40 222 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-202ENST00000379996 SGCZQ96LD1 299 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 C7orf50Q9BRJ6 194 aaKnown RBP6.93□□□□□ -1.3
CDKL5-202ENST00000379996 FBXL3Q9UKT7 428 aa6.93□□□□□ -1.3
CDKL5-202ENST00000379996 A0A1B0GVC2 190 aa6.92□□□□□ -1.3
CDKL5-202ENST00000379996 A6NIN4 97 aa6.92□□□□□ -1.3
CDKL5-202ENST00000379996 FABP7O15540 132 aa6.92□□□□□ -1.3
CDKL5-202ENST00000379996 EEF1E1O43324 174 aaKnown RBP6.92□□□□□ -1.3
CDKL5-202ENST00000379996 UTS2O95399 124 aa6.92□□□□□ -1.3
CDKL5-202ENST00000379996 TPOP07202 933 aa6.92□□□□□ -1.3
CDKL5-202ENST00000379996 PAICSP22234 425 aaKnown RBP6.92□□□□□ -1.3
CDKL5-202ENST00000379996 SLC6A6P31641 620 aa6.92□□□□□ -1.3
CDKL5-202ENST00000379996 NTF4P34130 210 aa6.92□□□□□ -1.3
CDKL5-202ENST00000379996 PTGDSP41222 190 aa6.92□□□□□ -1.3
CDKL5-202ENST00000379996 HTR2BP41595 481 aa6.92□□□□□ -1.3
CDKL5-202ENST00000379996 GDI2P50395 445 aaKnown RBP6.92□□□□□ -1.3
CDKL5-202ENST00000379996 SSR4P51571 173 aa6.92□□□□□ -1.3
CDKL5-202ENST00000379996 GNG2P59768 71 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms