RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 IGKV1D-43A0A0B4J1Z2 117 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 TMEM129A0AVI4 362 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 C12orf71A8MTZ7 269 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 PHYHO14832 338 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 TMCC2O75069 709 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF823P16415 610 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 TIMP3P35625 211 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 NAA10P41227 235 aaPredicted RBP10.88□□□□□ -0.67
TUBE1-202ENST00000368662 RPL5P46777 297 aaKnown RBP10.88□□□□□ -0.67
TUBE1-202ENST00000368662 PER3P56645 1201 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 DBPQ10586 325 aaPredicted RBP10.88□□□□□ -0.67
TUBE1-202ENST00000368662 IRF3Q14653 427 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 GUSBP1Q15486 140 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 SHFQ7M4L6 423 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 SLC35F2Q8IXU6 374 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 C9orf106Q8NAJ2 232 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 SLC26A10Q8NG04 563 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 OR10H4Q8NGA5 316 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 OR10H5Q8NGA6 315 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 CPT1CQ8TCG5 803 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 WDR76Q9H967 626 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 ACOT13Q9NPJ3 140 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 KCNG2Q9UJ96 466 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 A0A1W2PPL8 197 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 DAPL1A0PJW8 107 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 TVP23AA6NH52 213 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 RPL36A-HNRNPH2H7BZ11 118 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 SELENOFO60613 162 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 UPK3AO75631 287 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 IL2RAP01589 272 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 GAAP10253 952 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 NPR2P20594 1047 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 PCMT1P22061 227 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 CAPZA2P47755 286 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 ENTPD1P49961 510 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 ADAM8P78325 824 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 TEX30Q5JUR7 227 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 RTL6Q6ICC9 239 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 ST6GALNAC3Q8NDV1 305 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 OR6K3Q8NGY3 331 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 OR6N2Q8NGY6 317 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 RORBQ92753 470 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 RBM24Q9BX46 236 aaKnown RBP10.88□□□□□ -0.67
TUBE1-202ENST00000368662 SEC61A2Q9H9S3 476 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 CRLF2Q9HC73 371 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 ERVK13-1Q9NX77 482 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 UPB1Q9UBR1 384 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 FAM215AQ9Y5M1 114 aa10.88□□□□□ -0.67
TUBE1-202ENST00000368662 NBEAQ8NFP9 2946 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF587BE7ETH6 402 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 CNOT4O95628 575 aaKnown RBP10.87□□□□□ -0.67
TUBE1-202ENST00000368662 TFP02787 698 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 OR3A2P47893 321 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 ACTA2P62736 377 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 ACTG2P63267 376 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 GALEQ14376 348 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 KCNMB1Q16558 191 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 NRN1LQ496H8 165 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 PHYHD1Q5SRE7 291 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 TSPO2Q5TGU0 170 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 XAF1Q6GPH4 301 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 LYPD4Q6UWN0 246 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 TMPRSS11AQ6ZMR5 421 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 FOXL2NBQ6ZUU3 175 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 NUFIP2Q7Z417 695 aaKnown RBP10.87□□□□□ -0.67
TUBE1-202ENST00000368662 CDC20BQ86Y33 519 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 EGFL6Q8IUX8 553 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 GCNT2Q8N0V5 402 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 KLHL36Q8N4N3 616 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 NANOGP1Q8N7R0 232 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF454Q8N9F8 522 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 ALKBH3Q96Q83 286 aaPredicted RBP10.87□□□□□ -0.67
TUBE1-202ENST00000368662 NELFAQ9H3P2 528 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 MRPL22Q9NWU5 206 aaKnown RBP10.87□□□□□ -0.67
TUBE1-202ENST00000368662 MALT1Q9UDY8 824 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 LAMP5Q9UJQ1 280 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 CAB39Q9Y376 341 aaPredicted RBP10.87□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF670-ZNF695F2Z2N8 137 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF593O00488 134 aaPredicted RBP10.87□□□□□ -0.67
TUBE1-202ENST00000368662 TFAP2AP05549 437 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 LIMS3P0CW19 117 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 LIMS4P0CW20 117 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 JUNBP17275 347 aaPredicted RBP10.87□□□□□ -0.67
TUBE1-202ENST00000368662 MSR1P21757 451 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 ETV1P50549 477 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 CASP6P55212 293 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 LSM6P62312 80 aaKnown RBP10.87□□□□□ -0.67
TUBE1-202ENST00000368662 MRPS34P82930 218 aaKnown RBP10.87□□□□□ -0.67
TUBE1-202ENST00000368662 NEDD8Q15843 81 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 PCK2Q16822 640 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 UBE2UQ5VVX9 321 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF367Q7RTV3 350 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 DPY19L4Q7Z388 723 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 DOLPP1Q86YN1 238 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 UBE2J2Q8N2K1 259 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 OTOSQ8NHW6 89 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 ALG8Q9BVK2 526 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 CDADC1Q9BWV3 514 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 GPR35Q9HC97 309 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 POLE4Q9NR33 117 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms