RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 TSPAN19P0C672 248 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 ZNF14P17017 642 aaPredicted RBP8.08□□□□□ -1.12
MRPL55-216ENST00000366744 HOXB6P17509 224 aaKnown RBP8.08□□□□□ -1.12
MRPL55-216ENST00000366744 ATP6V1B2P21281 511 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 MSR1P21757 451 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 NOS3P29474 1203 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 CALCRP30988 508 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 SDHAP31040 664 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 SLC6A6P31641 620 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 PPOXP50336 477 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 EFNA4P52798 201 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 ERVK-25P63136 954 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 RUNX1T1Q06455 604 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 RAB39AQ14964 217 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 EFNB3Q15768 340 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 ADIPOQQ15848 244 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 SGCAQ16586 387 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 HIST3H3Q16695 136 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 C11orf71Q6IPW1 123 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 LCN8Q6JVE9 175 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 RPL13AP3Q6NVV1 102 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 TBPL2Q6SJ96 375 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 SMARCD3Q6STE5 483 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 NHLRC1Q6VVB1 395 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 MYPOPQ86VE0 399 aaPredicted RBP8.08□□□□□ -1.12
MRPL55-216ENST00000366744 SKA3Q8IX90 412 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 ALDH16A1Q8IZ83 802 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 ARIH2OSQ8N7S6 290 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 ICA1LQ8NDH6 482 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 SNX33Q8WV41 574 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 HDAC2Q92769 488 aaKnown RBP8.08□□□□□ -1.12
MRPL55-216ENST00000366744 ASB9Q96DX5 294 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 MS4A3Q96HJ5 214 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 C7orf34Q96L11 122 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 DHRS1Q96LJ7 313 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 TNFRSF13CQ96RJ3 184 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 KCNK17Q96T54 332 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 MRPL13Q9BYD1 178 aaKnown RBP8.08□□□□□ -1.12
MRPL55-216ENST00000366744 RAB1BQ9H0U4 201 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 C1orf21Q9H246 121 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 MAGIXQ9H6Y5 334 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 REEP1Q9H902 201 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 SIAEQ9HAT2 523 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 IL1RAPQ9NPH3 570 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 DLL4Q9NR61 685 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 B3GNT2Q9NY97 397 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 GDF2Q9UK05 429 aaPredicted RBP8.08□□□□□ -1.12
MRPL55-216ENST00000366744 ZNF346Q9UL40 294 aaKnown RBP8.08□□□□□ -1.12
MRPL55-216ENST00000366744 ADAM18Q9Y3Q7 739 aa8.08□□□□□ -1.12
MRPL55-216ENST00000366744 H7C1C5 153 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 M0R233 179 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 SOCS2O14508 198 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 CDC42EP2O14613 210 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 RENP00797 406 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 SEMG1P04279 462 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 CCNOP22674 350 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 NR4A1P22736 598 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 FPR3P25089 353 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 THBS4P35443 961 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 LIMS1P48059 325 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 ZNF133P52736 654 aaPredicted RBP8.07□□□□□ -1.12
MRPL55-216ENST00000366744 LCN6P62502 163 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 LSM11P83369 360 aaKnown RBP eCLIP8.07□□□□□ -1.12
MRPL55-216ENST00000366744 PPP2R2BQ00005 443 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 SCRN3Q0VDG4 424 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 TRIM25Q14258 630 aaKnown RBP8.07□□□□□ -1.12
MRPL55-216ENST00000366744 CARTPTQ16568 116 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 LRFN4Q6PJG9 635 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 ARL9Q6T311 187 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 DPY19L2P2Q6ZN68 376 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 WDFY1Q8IWB7 410 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 SVOPLQ8N434 492 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 ZNF519Q8TB69 540 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 FAM168AQ92567 244 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 HTRA1Q92743 480 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 Q96M85 177 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 PIMREGQ9BSJ6 248 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 IFT27Q9BW83 186 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 BCL2L14Q9BZR8 327 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 RERGLQ9H628 205 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 EIF3KQ9UBQ5 218 aaKnown RBP8.07□□□□□ -1.12
MRPL55-216ENST00000366744 NIPBLQ6KC79 2804 aaeCLIP8.07□□□□□ -1.12
MRPL55-216ENST00000366744 RTTNQ86VV8 2226 aa8.07□□□□□ -1.12
MRPL55-216ENST00000366744 NF1P21359 2839 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 PRSS37A4D1T9 235 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 RNF223E7ERA6 249 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 TNFRSF11BO00300 401 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 GNGT2O14610 69 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 CCNB2O95067 398 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 PPP1R3DO95685 299 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 SNAP29O95721 258 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 LCKP06239 509 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 HEXAP06865 529 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 CST2P09228 141 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 PATE4P0C8F1 98 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 SLC25A16P16260 332 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 CRABP1P29762 137 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 CDAP32320 146 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 GLRXP35754 106 aa8.06□□□□□ -1.12
MRPL55-216ENST00000366744 RAD52P43351 418 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 1127.1 ms