RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 TSSC4Q9Y5U2 329 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-238P-201ENST00000363313 BRD4O60885 1362 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-238P-201ENST00000363313 CFAP73A6NFT4 308 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 F5H6K3 240 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 C15orf65H3BRN8 121 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 REM1O75628 298 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 CAPN1P07384 714 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 CA3P07451 260 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 IMPDH1P20839 514 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 ATP5DP30049 168 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 HSPA1LP34931 641 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 HRH1P35367 487 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 ATP1B3P54709 279 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 KLRC3Q07444 240 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 TRIP10Q15642 601 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 SNRNP35Q16560 246 aaKnown RBP-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 MPV17L2Q567V2 206 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 TBPL2Q6SJ96 375 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 WDR88Q6ZMY6 472 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 GTPBP8Q8N3Z3 284 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 OR56B1Q8NGI3 324 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 UFD1Q92890 307 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 NSMCE2Q96MF7 247 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 SPATA13Q96N96 652 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 ZFP3Q96NJ6 502 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 GSDMCQ9BYG8 508 aa-0.21□□□□□ -2.44
RNU6-238P-201ENST00000363313 MAST4O15021 2626 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 SLC9B1P1A6NJY1 282 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 ZNF726A6NNF4 738 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 H7C417 338 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 SDHDO14521 159 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 GLSO94925 669 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 AP2A1O95782 977 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 IGKV1-39P01597 117 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 IGKV1D-39P04432 117 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 MMP7P09237 267 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 P0DMU3 169 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 FAM231AP0DMU4 169 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 FAM231CP0DMU5 169 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 GSSP48637 474 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 ZNF138P52744 262 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 ARHGAP19Q14CB8 494 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 YIF1BQ5BJH7 314 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 C1orf220Q5T0J3 134 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 CCDC65Q8IXS2 484 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 ACOT4Q8N9L9 421 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 BLNKQ8WV28 456 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 TMEM186Q96B77 213 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 FAM3DQ96BQ1 224 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 P2RX4Q99571 388 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 FGF23Q9GZV9 251 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 ROPN1Q9HAT0 212 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 MTCH1Q9NZJ7 389 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 OR51B4Q9Y5P0 310 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 RPGRIP1LQ68CZ1 1315 aa-0.22□□□□□ -2.44
RNU6-238P-201ENST00000363313 MED13Q9UHV7 2174 aa-0.22□□□□□ -2.45
RNU6-238P-201ENST00000363313 HIDE1A8MVS5 230 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 PRAMEF26H0Y7S4 382 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 FMO6PO60774 539 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 SLC35G6P0C7Q6 338 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 LYNX1P0DP58 116 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 RAB3BP20337 219 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 HLA-DMAP28067 261 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 SERPINB5P36952 375 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 ARFIP1P53367 373 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 CCNA1P78396 465 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 OR5I1Q13606 314 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 KCTD21Q4G0X4 260 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 SFT2D3Q587I9 215 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 FBXW12Q6X9E4 464 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 ACOT1Q86TX2 421 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 MUC7Q8TAX7 377 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 PYROXD1Q8WU10 500 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 MRGPRFQ96AM1 343 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 IGF2BP2-AS1Q96M15 143 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 RNF2Q99496 336 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 KCTD14Q9BQ13 255 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 METTL7AQ9H8H3 244 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 ACTR8Q9H981 624 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 NHEJ1Q9H9Q4 299 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 SLC38A10Q9HBR0 1119 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 CSNK1G1Q9HCP0 422 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 ATXN10Q9UBB4 475 aa-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 MRPS18BQ9Y676 258 aaKnown RBP-0.23□□□□□ -2.45
RNU6-238P-201ENST00000363313 TRGV4A0A0C4DH28 118 aa-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 TCRBV9S1A1TA0A576 114 aa-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 PALMO75781 387 aa-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 UTS2O95399 124 aa-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 OXSR1O95747 527 aaPredicted RBP-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 FGF1P05230 155 aa-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 DRD5P21918 477 aa-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 AHCYP23526 432 aa-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 GCAP28676 217 aa-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 P2RY1P47900 373 aa-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 ACOT2P49753 483 aa-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 SLC26A5P58743 744 aa-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 C2orf54Q08AI8 447 aa-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 FOXF1Q12946 379 aa-0.24□□□□□ -2.45
RNU6-238P-201ENST00000363313 PRDX4Q13162 271 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms