RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PATJQ8NI35 1801 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 IGKV6-21A0A0C4DH24 114 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 E5RGE8 158 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 G3V3Q6 166 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 CTSLP07711 333 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 OR4E1P0C645 316 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 REEP5Q00765 189 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 APCDD1Q8J025 514 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 TMEM130Q8N3G9 435 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 CHRDQ9H2X0 955 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 PLEKHA2Q9HB19 425 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 NSG2Q9Y328 171 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 V9GYS6 101 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 IFITM5A6NNB3 132 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 CCSO14618 274 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 CLDN1O95832 211 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 GABRA2P47869 451 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 SLC6A11P48066 632 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 C19orf57Q0VDD7 668 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 KIAA1958Q8N8K9 716 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 KCMF1Q9P0J7 381 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 PDGFBP01127 241 aaPredicted RBP8.09□□□□□ -1.12
COL6A6-201ENST00000358511 HOXA11P31270 313 aaPredicted RBP8.09□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF280AP59817 542 aaPredicted RBP8.09□□□□□ -1.12
COL6A6-201ENST00000358511 AADACL3Q5VUY0 350 aa8.09□□□□□ -1.12
COL6A6-201ENST00000358511 TMEM182Q6ZP80 229 aaPredicted RBP8.09□□□□□ -1.12
COL6A6-201ENST00000358511 SLC16A12Q6ZSM3 486 aa8.09□□□□□ -1.12
COL6A6-201ENST00000358511 POM121BA6NF01 834 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 IGLON5A6NGN9 336 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 BET1O15155 118 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 SOD1P00441 154 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 ITGB7P26010 798 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 SPICQ8N5J4 248 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 CLEC1AQ8NC01 280 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 TMEM255BQ8WV15 326 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 SECTM1Q8WVN6 248 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 OR5B2Q96R09 309 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 C16orf70Q9BSU1 422 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 PDE7BQ9NP56 450 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 KCNG2Q9UJ96 466 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 SLC45A1Q9Y2W3 748 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF646O15015 1829 aaPredicted RBP8.08□□□□□ -1.12
COL6A6-201ENST00000358511 F6UZH7 168 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 ACHEP22303 614 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 PMPCAQ10713 525 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 SH2D5Q6ZV89 423 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 LGI3Q8N145 548 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 GPR119Q8TDV5 335 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 LIPHQ8WWY8 451 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 SLC23A2Q9UGH3 650 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 PADI1Q9ULC6 663 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 RFPL4AA6NLU0 287 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 RFPL4AL1F8VTS6 287 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 ST8SIA3O43173 380 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 CST2P09228 141 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 MMP11P24347 488 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 ATP1B3P54709 279 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 TEAD2Q15562 447 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 SLC36A2Q495M3 483 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 OR52W1Q6IF63 320 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 SLC35D2Q76EJ3 337 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 RHOUQ7L0Q8 258 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 BCL7CQ8WUZ0 217 aaPredicted RBP8.08□□□□□ -1.12
COL6A6-201ENST00000358511 WDR92Q96MX6 357 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 KDM4EB2RXH2 506 aaPredicted RBP8.08□□□□□ -1.12
COL6A6-201ENST00000358511 H3BML4 177 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 CD37P11049 281 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 PCK2Q16822 640 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 PKDCCQ504Y2 493 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 PSMF1Q92530 271 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 CORO2AQ92828 525 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 MRPS28Q9Y2Q9 187 aaKnown RBP8.08□□□□□ -1.12
COL6A6-201ENST00000358511 AIFM1O95831 613 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 F2RP25116 425 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 RPL12P30050 165 aaKnown RBP8.08□□□□□ -1.12
COL6A6-201ENST00000358511 HOXA1P49639 335 aaPredicted RBP8.08□□□□□ -1.12
COL6A6-201ENST00000358511 TPPP2P59282 170 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 MRPL21Q7Z2W9 205 aaKnown RBP8.08□□□□□ -1.12
COL6A6-201ENST00000358511 LYG2Q86SG7 212 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 LTB4R2Q9NPC1 389 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 DOCK4Q8N1I0 1966 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 RNASEK-C17orf49H0YIS7 233 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 HNRNPA2B1P22626 353 aaKnown RBP8.08□□□□□ -1.12
COL6A6-201ENST00000358511 BLVRBP30043 206 aaPredicted RBP8.08□□□□□ -1.12
COL6A6-201ENST00000358511 S100A7AQ86SG5 101 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 NLGN4XQ8N0W4 816 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 OR5AP2Q8NGF4 316 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 OR10D4PQ8NGN7 298 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF596Q8TC21 504 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 THAP3Q8WTV1 239 aaPredicted RBP8.08□□□□□ -1.12
COL6A6-201ENST00000358511 ST6GAL2Q96JF0 529 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 RTP3Q9BQQ7 232 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 GPR174Q9BXC1 333 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 CPEB1Q9BZB8 566 aaKnown RBP8.08□□□□□ -1.12
COL6A6-201ENST00000358511 MRPL22Q9NWU5 206 aaKnown RBP8.08□□□□□ -1.12
COL6A6-201ENST00000358511 PI4KAP42356 2102 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 IGKV6D-21A0A0A0MT36 114 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 TRAV1-2A0A0B4J238 106 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 AP4M1O00189 453 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 ARRB1P49407 418 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms