RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 S100A5P33763 92 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 PSMB10P40306 273 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 MTNR1BP49286 362 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 CARD18P57730 90 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 ROM1Q03395 351 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 MXD1Q05195 221 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 CAMK2DQ13557 499 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 PDSS1Q5T2R2 415 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 LIPNQ5VXI9 398 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 KCTD18Q6PI47 426 aaPredicted RBP20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 SLC25A47Q6Q0C1 308 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 TRILQ7L0X0 811 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 MFSD4AQ8N468 514 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 FOXN4Q96NZ1 517 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 IKZF2Q9UKS7 526 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 CDV3Q9UKY7 258 aaKnown RBP20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 MUC6Q6W4X9 2439 aa20.34■□□□□ 0.85
SCAMP3-202ENST00000355379 PSMD9O00233 223 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 CASKO14936 926 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 GATBO75879 557 aaKnown RBP20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 CLEC2LP0C7M8 214 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 BMP4P12644 408 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 MEOX1P50221 254 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 CLDN17P56750 224 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 INSL4Q14641 139 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 SLC17A1Q14916 467 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 ACSM3Q53FZ2 586 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 GALNTL5Q7Z4T8 443 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 OR9K2Q8NGE7 335 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 SLC39A7Q92504 469 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 UCN2Q96RP3 112 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 ALPK2Q86TB3 2170 aa20.33■□□□□ 0.85
SCAMP3-202ENST00000355379 NPIPA2E9PIF3 369 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 NPIPA3F8WFD2 350 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 SMAD9O15198 467 aaKnown RBP20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 LAP3P28838 519 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 RPS27P42677 84 aaKnown RBP20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 PLGLB1Q02325 96 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 CDC20Q12834 499 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 ALKBH1Q13686 389 aaKnown RBP20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 EIF2B1Q14232 305 aaKnown RBP20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 FDX2Q6P4F2 183 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 UNQ9370/PRO34162Q6UXP9 181 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 CEACAM19Q7Z692 300 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 ZNF679Q8IYX0 411 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 PHYHIPQ92561 330 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 AMELYQ99218 206 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 ABHD6Q9BV23 337 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 SMURF1Q9HCE7 757 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 TIGARQ9NQ88 270 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 SLCO1C1Q9NYB5 712 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 ZNF292O60281 2723 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 IGHV3-15A0A0B4J1V0 119 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 TAF4O00268 1085 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 MPZL1O95297 269 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 ZNF133P52736 654 aaPredicted RBP20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 SUCLG1P53597 346 aaKnown RBP20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 NANOS3P60323 173 aaKnown RBP20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 ARG2P78540 354 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 HNRNPA0Q13151 305 aaKnown RBP20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 INAQ16352 499 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 MEP1BQ16820 701 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 IGFL2Q6UWQ7 119 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 TMEM251Q8N6I4 163 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 OR52N5Q8NH56 324 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 TMEM54Q969K7 222 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 MCHR2Q969V1 340 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 INTS12Q96CB8 462 aaKnown RBP20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 KCNS3Q9BQ31 491 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 TPK1Q9H3S4 243 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 PLEKHB1Q9UF11 243 aaPredicted RBP20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 ZNF281Q9Y2X9 895 aa20.32■□□□□ 0.84
SCAMP3-202ENST00000355379 CFAP54Q96N23 3096 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 TRABD2BA6NFA1 517 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 H0YC42 278 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 TMCC2O75069 709 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 ETV6P41212 452 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 STARP49675 285 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 RPS11P62280 158 aaKnown RBP eCLIP20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 KCNMB1Q16558 191 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 YIF1BQ5BJH7 314 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 TPRA1Q86W33 373 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 ZFP62Q8NB50 900 aaPredicted RBP20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 TMEM178AQ8NBL3 297 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 OR10D3Q8NH80 312 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 C11orf40Q8WZ69 217 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 AP3S1Q92572 193 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 NSMAFQ92636 917 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 CPNE4Q96A23 557 aaPredicted RBP20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 MAP6Q96JE9 813 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 ING1Q9UK53 422 aaPredicted RBP20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 B3GNT3Q9Y2A9 372 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 MED12Q93074 2177 aa20.31■□□□□ 0.84
SCAMP3-202ENST00000355379 SHISA3A0PJX4 238 aa20.3■□□□□ 0.84
SCAMP3-202ENST00000355379 CXCL13O43927 109 aa20.3■□□□□ 0.84
SCAMP3-202ENST00000355379 CFL1P23528 166 aaKnown RBP20.3■□□□□ 0.84
SCAMP3-202ENST00000355379 CLDN15P56746 228 aa20.3■□□□□ 0.84
SCAMP3-202ENST00000355379 ZMAT1Q5H9K5 638 aa20.3■□□□□ 0.84
SCAMP3-202ENST00000355379 ZNF766Q5HY98 468 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms