RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 COMMD4Q9H0A8 199 aa13.6□□□□□ -0.23
TUBB4B-201ENST00000340384 SH2D2AQ9NP31 389 aa13.6□□□□□ -0.23
TUBB4B-201ENST00000340384 SACM1LQ9NTJ5 587 aa13.6□□□□□ -0.23
TUBB4B-201ENST00000340384 HPF1Q9NWY4 346 aa13.6□□□□□ -0.23
TUBB4B-201ENST00000340384 HDGFL3Q9Y3E1 203 aa13.6□□□□□ -0.23
TUBB4B-201ENST00000340384 PCNX3Q9H6A9 2034 aa13.6□□□□□ -0.23
TUBB4B-201ENST00000340384 IGLV1-36A0A0B4J1U3 117 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 SHISA3A0PJX4 238 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 FAM25AB3EWG3 89 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 FAM25CB3EWG5 89 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 FAM25GB3EWG6 89 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 MS4A18H0YCH9 400 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 H3BML4 177 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 HPGDSO60760 199 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 AKR7A3O95154 331 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 WISP1O95388 367 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 WDPCPO95876 746 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 PDGFAP04085 211 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 CD96P40200 585 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 PSMB10P40306 273 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 HSF1Q00613 529 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 RASGEF1BQ0VAM2 473 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 ALKBH1Q13686 389 aaKnown RBP13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 MS4A18Q3C1V0 323 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 LINC00303Q3SY05 128 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 PYDC2Q56P42 97 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 SLC22A10Q63ZE4 541 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 IGFL2Q6UWQ7 119 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 SLC35D2Q76EJ3 337 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 DPY19L4Q7Z388 723 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 MDGA2Q7Z553 956 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 LRRC28Q86X40 367 aaPredicted RBP13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 POC1BQ8TC44 478 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 PAQR8Q8TEZ7 354 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 THEM6Q8WUY1 208 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 NTNG2Q96CW9 530 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 ARL5BQ96KC2 179 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 SGCZQ96LD1 299 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 AGAP4Q96P64 663 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 SDHCQ99643 169 aaPredicted RBP13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 SLITRK2Q9H156 845 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 PRORYQ9H606 182 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 PROK2Q9HC23 129 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 RHBDL2Q9NX52 303 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 ABRACLQ9P1F3 81 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 RPH3AQ9Y2J0 694 aaPredicted RBP13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 CSAG2Q9Y5P2 127 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 BOD1L1Q8NFC6 3051 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 PKD1L2Q7Z442 2459 aa13.59□□□□□ -0.23
TUBB4B-201ENST00000340384 ANKRD33BA6NCL7 494 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 TMEM212A6NML5 194 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 NOTOA8MTQ0 251 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 B4DXG7 233 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 MAGEB4O15481 346 aaPredicted RBP13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 NEURL1O76050 574 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 OR8G3PP0DMU2 310 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 IMPDH2P12268 514 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 EVX1P49640 407 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 POU3F1Q03052 451 aaPredicted RBP13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 MYBPHQ13203 477 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 RIN1Q13671 783 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 MELKQ14680 651 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 ZNF79Q15937 498 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 LIPNQ5VXI9 398 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 CNIH2Q6PI25 160 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 WDSUB1Q8N9V3 476 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 OR5AK2Q8NH90 309 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 NSMAFQ92636 917 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 CNTNAP3BQ96NU0 1288 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 SIGLEC12Q96PQ1 595 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 UBL7Q96S82 380 aaPredicted RBP13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 SMAD5Q99717 465 aaKnown RBP13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 CNTNAP3Q9BZ76 1288 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 POLE4Q9NR33 117 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 MRM2Q9UI43 246 aaKnown RBP13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 MAP1BP46821 2468 aaKnown RBP13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 USP24Q9UPU5 2620 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 NBEAQ8NFP9 2946 aa13.58□□□□□ -0.24
TUBB4B-201ENST00000340384 BSNQ9UPA5 3926 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 ZNF593O00488 134 aaPredicted RBP13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 SNPHO15079 494 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 KHDRBS3O75525 346 aaKnown RBP13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 UPK3AO75631 287 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 ABHD16AO95870 558 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 HNRNPCP07910 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 IL7P13232 177 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 IFNGR1P15260 489 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 ZNF823P16415 610 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 CD97P48960 835 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 DSCR4P56555 118 aaPredicted RBP13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 OR2B6P58173 313 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 ADAM8P78325 824 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 SLC35A1P78382 337 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 MFAP5Q13361 173 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 ABHD17BQ5VST6 288 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 PRAMEF20Q5VT98 475 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 SPINK14Q6IE38 97 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 UEVLDQ8IX04 471 aa13.57□□□□□ -0.24
TUBB4B-201ENST00000340384 GTPBP8Q8N3Z3 284 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms