RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 FBXW12Q6X9E4 464 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 ARIH2OSQ8N7S6 290 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 GSX2Q9BZM3 304 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 SLC19A3Q9BZV2 496 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 WSB2Q9NYS7 404 aaPredicted RBP12.6□□□□□ -0.39
SPAST-201ENST00000315285 CHRNA9Q9UGM1 479 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 KCNE3Q9Y6H6 103 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 KIAA1217Q5T5P2 1943 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 CCDC163A0A0D9SF12 145 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 LOC107986453A0A1B0GWG9 222 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 ANKRD34BA5PLL1 514 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 ANKRD61A6NGH8 418 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 APEHP13798 732 aaKnown RBP12.6□□□□□ -0.39
SPAST-201ENST00000315285 POU3F3P20264 500 aaPredicted RBP12.6□□□□□ -0.39
SPAST-201ENST00000315285 CHATP28329 748 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 ERVK-16P61578 105 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 RBPMSQ93062 196 aaKnown RBP12.6□□□□□ -0.39
SPAST-201ENST00000315285 ZNF845Q96IR2 970 aaPredicted RBP12.6□□□□□ -0.39
SPAST-201ENST00000315285 TSSK2Q96PF2 358 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 ZNF346Q9UL40 294 aaKnown RBP12.6□□□□□ -0.39
SPAST-201ENST00000315285 SLC17A4Q9Y2C5 497 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 IFITM5A6NNB3 132 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 BET1O15155 118 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 CTGFP29279 349 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 HOXC8P31273 242 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 CLDN20P56880 219 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 ZNF681Q96N22 645 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 NMNAT2Q9BZQ4 307 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 TAS2R4Q9NYW5 299 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 CHRM2P08172 466 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 GIPP09681 153 aaPredicted RBP12.59□□□□□ -0.39
SPAST-201ENST00000315285 GABRB1P18505 474 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 ZNF674Q2M3X9 581 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 TMEM196Q5HYL7 178 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 OR56B2PQ8NGI1 322 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 DOK1Q99704 481 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 EMC6Q9BV81 110 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 POFUT1Q9H488 388 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 A0A0A6YYJ9 748 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 A0A0B4J203 849 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 TMEM221A6NGB7 291 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 ALX3O95076 343 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 SLC34A2O95436 690 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 TGM6O95932 706 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 APOBEC1P41238 236 aaKnown RBP12.59□□□□□ -0.39
SPAST-201ENST00000315285 IDH3GP51553 393 aaPredicted RBP12.59□□□□□ -0.39
SPAST-201ENST00000315285 MDGA2Q7Z553 956 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 PXT1Q8NFP0 134 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 FKRPQ9H9S5 495 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 DNAJB11Q9UBS4 358 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 SERTM1A2A2V5 107 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 HRO43593 1189 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 YBX1P67809 324 aaKnown RBP12.59□□□□□ -0.39
SPAST-201ENST00000315285 EBPQ15125 230 aaKnown RBP12.59□□□□□ -0.39
SPAST-201ENST00000315285 STK11Q15831 433 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 CMTM4Q8IZR5 234 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 PLEKHA3Q9HB20 300 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 PRDM7Q9NQW5 492 aa12.59□□□□□ -0.39
SPAST-201ENST00000315285 PRKACAP17612 351 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 RPS27P42677 84 aaKnown RBP12.58□□□□□ -0.4
SPAST-201ENST00000315285 RBM39Q14498 530 aaKnown RBP12.58□□□□□ -0.4
SPAST-201ENST00000315285 NKAIN1Q4KMZ8 207 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 TIGD3Q6B0B8 471 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 TMEM81Q6P7N7 255 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 RDH10Q8IZV5 341 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 OR9K2Q8NGE7 335 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 PIGTQ969N2 578 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 SEMA4CQ9C0C4 833 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 LAT2Q9GZY6 243 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 ZNF576Q9H609 170 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 FAM212BQ9NTI7 297 aaPredicted RBP12.58□□□□□ -0.4
SPAST-201ENST00000315285 NPY4RP50391 375 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 EMDP50402 254 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 FGL2Q14314 439 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 SLC16A12Q6ZSM3 486 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 TMUB2Q71RG4 321 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 GJC3Q8NFK1 279 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 SCARB1Q8WTV0 552 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 ARHGDIGQ99819 225 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 CNTNAP3Q9BZ76 1288 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 SCPEP1Q9HB40 452 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 CD160O95971 181 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 IFNA4P05014 189 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 ITGB2P05107 769 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 GRB2P62993 217 aaKnown RBP12.58□□□□□ -0.4
SPAST-201ENST00000315285 HSF1Q00613 529 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 SHHQ15465 462 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 FAM27D1Q5T7N8 215 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 LPCAT3Q6P1A2 487 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 OR2L13Q8N349 312 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 SLC25A43Q8WUT9 341 aaPredicted RBP12.58□□□□□ -0.4
SPAST-201ENST00000315285 RNF141Q8WVD5 230 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 NEURL2Q9BR09 285 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 PIGQQ9BRB3 760 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 KIF25Q9UIL4 384 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 TMEM200CA6NKL6 621 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 MCRIP1C9JLW8 97 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 PRKNO60260 465 aaPredicted RBP12.58□□□□□ -0.4
SPAST-201ENST00000315285 TBX19O60806 448 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 SPNP16150 400 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms