RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ESPNLQ6ZVH7 1005 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 OR56B2PQ8NGI1 322 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 OR51S1Q8NGJ8 323 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 MED18Q9BUE0 208 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 ACER3Q9NUN7 267 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 CYB5R1Q9UHQ9 305 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 TMEFF2Q9UIK5 374 aaPredicted RBP10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 WIF1Q9Y5W5 379 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 AIPO00170 330 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 DPM1O60762 260 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 NQO2P16083 231 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 TAGLN2P37802 199 aaKnown RBP10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 SNRPEP62304 92 aaKnown RBP10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 C19orf57Q0VDD7 668 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 LRIF1Q5T3J3 769 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 HIST2H3AQ71DI3 136 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 SLC16A13Q7RTY0 426 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 SFTPA1Q8IWL2 248 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 SLC35F3Q8IY50 421 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 LILRA3Q8N6C8 439 aaPredicted RBP10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 BBS1Q8NFJ9 593 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 HPSE2Q8WWQ2 592 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 TAAR8Q969N4 342 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 DDIT4LQ96D03 193 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 MACROD1Q9BQ69 325 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 TOX3O15405 576 aaPredicted RBP10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 LDB3O75112 727 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 B3GALT4O96024 378 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 GDF1P27539 372 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 CD82P27701 267 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 HTR1FP30939 366 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 MAT1AQ00266 395 aaKnown RBP10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 OR4D9Q8NGE8 314 aa10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 PARP12Q9H0J9 701 aaKnown RBP10.43□□□□□ -0.74
NPC1L1-201ENST00000289547 H0YIG0 161 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 DIRAS3O95661 229 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 OR8G3PP0DMU2 310 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 SBSNQ6UWP8 590 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 OR11A1Q9GZK7 315 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 EXO1Q9UQ84 846 aaKnown RBP10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 ZNF98A6NK75 572 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 GABARAPH6UMI1 98 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 OR13C7P0DN81 318 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 MMP11P24347 488 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 RAB39BQ96DA2 213 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 PITX2Q99697 317 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 TMEM121BQ9BXQ6 578 aaPredicted RBP10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 F5P12259 2224 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 NPIPA5A0A0B4J1W7 369 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 ZAR1LA6NP61 321 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 NPIPA7E9PJI5 369 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 OR2F2O95006 317 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 CBX7O95931 251 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 SBK2P0C263 348 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 NPIPA8P0DM63 369 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 CD1CP29017 333 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 HSD17B7P56937 341 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 SPOCK1Q08629 439 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 OR2F1Q13607 317 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 EVA1AQ9H8M9 152 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 FN3KRPQ9HA64 309 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 LYRM4Q9HD34 91 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 ACSS1Q9NUB1 689 aaPredicted RBP10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 FBXL4Q9UKA2 621 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 MCTS1Q9ULC4 181 aaKnown RBP10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 RHBDD3Q9Y3P4 386 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 CHST2Q9Y4C5 530 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 TMEM72A0PK05 275 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 ARGFXA6NJG6 315 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 CTNSO60931 367 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 CRTAPO75718 401 aaPredicted RBP10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 STK17BO94768 372 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 ACHEP22303 614 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 RAB13P51153 203 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 MRPL49Q13405 166 aaKnown RBP10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 MEX3BQ6ZN04 569 aaKnown RBP10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 NDUFAF7Q7L592 441 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 LILRB2Q8N423 598 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 FAM26EQ8N5C1 309 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 OR9A2Q8NGT5 310 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 HAVCR2Q8TDQ0 301 aa10.42□□□□□ -0.74
NPC1L1-201ENST00000289547 SYT7O43581 403 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 G0S2P27469 103 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 POU3F4P49335 361 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 UCNP55089 124 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 PCBP4P57723 403 aaKnown RBP10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 KCNJ10P78508 379 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 ERV3-1Q14264 604 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 FAAP20Q6NZ36 180 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 OR13C2Q8NGS9 318 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 CLDN23Q96B33 292 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 NIPSNAP3BQ9BS92 247 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 MS4A8Q9BY19 250 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 GFYI3L273 518 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 PHOX2AO14813 284 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 NSA2O95478 260 aaKnown RBP10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 EIF4EP06730 217 aaKnown RBP10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 PLP2Q04941 152 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 KCNAB1Q14722 419 aa10.41□□□□□ -0.74
NPC1L1-201ENST00000289547 FAHD1Q6P587 224 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms