RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 ADAM18Q9Y3Q7 739 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF780BQ9Y6R6 833 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 TVP23AA6NH52 213 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 FAM171A2A8MVW0 826 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 PRR32B1ATL7 298 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 EIF1AYO14602 144 aaKnown RBP6.56□□□□□ -1.36
CSDE1-201ENST00000261443 MBTPS2O43462 519 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 FBXO24O75426 580 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 LEFTY1O75610 366 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 IFNA2P01563 188 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 IFNA17P01571 189 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 ADH1AP07327 375 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 FCGR3AP08637 254 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF735P0CB33 412 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 TIMP2P16035 220 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 CSRP1P21291 193 aaKnown RBP6.56□□□□□ -1.36
CSDE1-201ENST00000261443 PPICP45877 212 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 EIF1AXP47813 144 aaKnown RBP6.56□□□□□ -1.36
CSDE1-201ENST00000261443 DVL1P1P54792 670 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-201ENST00000261443 HMGN3Q15651 99 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 ODF4Q2M2E3 257 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 SLC48A1Q6P1K1 146 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 CD163Q86VB7 1156 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 SLC25A42Q86VD7 318 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 ACOT4Q8N9L9 421 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 OR13C8Q8NGS7 320 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 OR2A12Q8NGT7 310 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 OR2G2Q8NGZ5 317 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 ADAMTS17Q8TE56 1095 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 TMEM106AQ96A25 262 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 RNF166Q96A37 237 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-201ENST00000261443 COL26A1Q96A83 441 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 RRNAD1Q96FB5 475 aaKnown RBP6.56□□□□□ -1.36
CSDE1-201ENST00000261443 LURAP1Q96LR2 239 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 NMNAT3Q96T66 252 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 SLC6A7Q99884 636 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 PIGQQ9BRB3 760 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 C20orf24Q9BUV8 137 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 AICDAQ9GZX7 198 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 CST11Q9H112 138 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 CHRDQ9H2X0 955 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 C8orf33Q9H7E9 229 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-201ENST00000261443 FRRS1LQ9P0K9 344 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 CHRNA9Q9UGM1 479 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 MSRAQ9UJ68 235 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 CHD7Q9P2D1 2997 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 TCF20Q9UGU0 1960 aaKnown RBP6.56□□□□□ -1.36
CSDE1-201ENST00000261443 NPIPA5A0A0B4J1W7 369 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 NPIPA7E9PJI5 369 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 LRP3O75074 770 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 ADAMTS4O75173 837 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 AGR2O95994 175 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 SERPINA5P05154 406 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 THBS1P07996 1170 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 HOXB5P09067 269 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 NPIPA8P0DM63 369 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 CYBAP13498 195 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 HOXA5P20719 270 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 HIST1H1TP22492 207 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-201ENST00000261443 CD1CP29017 333 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 RPL4P36578 427 aaKnown RBP6.55□□□□□ -1.36
CSDE1-201ENST00000261443 GATMP50440 423 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 ADAM8P78325 824 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 ELOCQ15369 112 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 RAB11BQ15907 218 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 ARHGAP11BQ3KRB8 267 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 MFSD12Q6NUT3 480 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 SLC43A2Q8N370 569 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF676Q8N7Q3 588 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 ZSCAN4Q8NAM6 433 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-201ENST00000261443 FAM3DQ96BQ1 224 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 LMF1Q96S06 567 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 SDF2Q99470 211 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 SYT4Q9H2B2 425 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 DPEP2Q9H4A9 486 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 TRIOO75962 3097 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 SPTBN5Q9NRC6 3674 aaKnown RBP6.55□□□□□ -1.36
CSDE1-201ENST00000261443 KNL1Q8NG31 2342 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 MYOFQ9NZM1 2061 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 TICRRQ7Z2Z1 1910 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 TRBV5-5A0A0J9YX44 114 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 LOC100289279A0A1B0GTE1 492 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 A0A1B0GTH9 108 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 TBC1D3BA6NDS4 549 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 CXorf65A6NEN9 183 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 TBC1D3FA6NER0 549 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-201ENST00000261443 BLOC1S5-TXNDC5H3BN57 136 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 CLEC3AO75596 197 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 ARG1P05089 322 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 ITGA5P08648 1049 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 AKR1A1P14550 325 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 SERPINF1P36955 418 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 SPCS3P61009 180 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 KIAA0141Q14154 515 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-201ENST00000261443 DUSP5Q16690 384 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 TBC1D3GQ6DHY5 549 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 SLC39A5Q6ZMH5 540 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 REC114Q7Z4M0 266 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 FRMD1Q8N878 549 aa6.55□□□□□ -1.36
CSDE1-201ENST00000261443 PCSK9Q8NBP7 692 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms