RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Vmn2r89O35199 507 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Wsb2O54929 404 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Hoxd4P10628 250 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Eif1P48024 113 aaKnown RBP9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Col10a1Q05306 680 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fthl17dQ3SXD1 176 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fthl17fQ3SXD2 176 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Eif4e1bQ3UTA9 244 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fbxw16Q497Z0 464 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Zfp729aQ4QQP3 973 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr3Q60879 313 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr1065Q7TR70 313 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Orai1Q8BWG9 304 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Mrgprb5Q91ZB9 322 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fthl17Q99MX2 176 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Nsa2Q9CR47 260 aaKnown RBP9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gfod2Q9CYH5 385 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Toe1Q9D2E2 511 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc35a4Q9D321 324 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Chst11Q9JME2 352 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr543E9PWI5 336 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Vmn1r204I7HIK1 302 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 GzmmO08643 264 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Hoxb9P20615 250 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Epha4Q03137 986 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr1135Q7TR42 310 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Mrps23Q8VE22 177 aaKnown RBP9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr229Q8VFN5 307 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr935Q8VG16 308 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Raf1Q99N57 648 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc19a3Q99PL8 488 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Rtl8bQ9D1F0 113 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 1700069L16RikQ9D9H5 109 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ch25hQ9Z0F5 298 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Trbv21A0A0A6YX06 97 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 A26c2A0A140LHE4 291 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm21833J3QPK1 500 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Chrnb1P09690 501 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 UbcP0CG50 734 aaKnown RBP9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Cyb5aP56395 134 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Pck2Q8BH04 640 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Csnk1g2Q8BVP5 415 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr970Q8VFN3 311 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Thyn1Q91YJ3 226 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ndufa9Q9DC69 377 aaKnown RBP9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr937Q9EQB4 311 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Syngr4Q9Z1L2 233 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ly75Q60767 1723 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm8797A0A0A6YW67 77 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 A0A1Y7VIT9 351 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Prdm13E9PZZ1 754 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm8882E9Q7E4 283 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm21812J3QN84 227 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 UbbP0CG49 305 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Tango2P54797 276 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Rps27aP62983 156 aaKnown RBP9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Uba52P62984 128 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Adra1aP97718 466 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Anxa7Q07076 463 aaKnown RBP9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Cdv3Q4VAA2 281 aaKnown RBP9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fbxl14Q8BID8 400 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fitm1Q91V79 292 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Flvcr2Q91X85 551 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr114Q923Q8 312 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Stoml2Q99JB2 353 aaKnown RBP9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Lrrc51Q9DAK8 192 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Scamp2Q9ERN0 329 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Eny2Q9JIX0 101 aaKnown RBP9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 SrrQ9QZX7 339 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Zbtb34A2ATY4 518 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm7714E9Q079 131 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr376E9Q4M1 320 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Rdh19G5E8H9 318 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm21797J3QNW5 180 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gal3st2cQ3ULK5 396 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc5a12Q49B93 619 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr304Q7TS03 333 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Megf11Q80T91 1091 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 CebpzosQ8BTE5 80 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Acaa2Q8BWT1 397 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Krtcap3Q8K177 240 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Crtac1Q8R555 646 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Mrgpra3Q91WW3 302 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 TrirQ9D735 173 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Keg1Q9DCY0 295 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Kmt2eQ3UG20 1868 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Vmn1r9A2RST7 299 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 IqckD3YYL3 290 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Amy2a1E9PV85 245 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Zmat3O54836 290 aaKnown RBP9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Kcnj1O88335 372 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 P01679 107 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Sult4a1P63046 284 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Itgb2lQ3UV74 738 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Zfp36l3Q5ISE2 725 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Sema3bQ62177 748 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Surf4Q64310 269 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Med16Q6PGF3 828 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr657Q7TRP7 319 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Rnf170Q8CBG9 286 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms