RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 KCNK17Q96T54 332 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 SMR3AQ99954 134 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 FBXL3Q9UKT7 428 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 ZNF346Q9UL40 294 aaKnown RBP13.03□□□□□ -0.32
PHGDH-231ENST00000641939 V9GYQ6 96 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 HIVEP2P31629 2446 aa13.02□□□□□ -0.32
PHGDH-231ENST00000641939 FAM171A2A8MVW0 826 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 CDC42EP2O14613 210 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 PDE5AO76074 875 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 DIRAS1O95057 198 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 SEMG1P04279 462 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 OR4A8P0C604 315 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 PATE4P0C8F1 98 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 NR2C1P13056 603 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 CD47Q08722 323 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 ADIPOQQ15848 244 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 IQCCQ4KMZ1 466 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 FAM205BPQ63HN1 556 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 CLEC9AQ6UXN8 241 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 DPPA2Q7Z7J5 298 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 IGFN1Q86VF2 1251 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 MCUR1Q96AQ8 359 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 FAM46AQ96IP4 442 aaKnown RBP13.02□□□□□ -0.33
PHGDH-231ENST00000641939 DHRS1Q96LJ7 313 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 SH3GL3Q99963 347 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 ALG12Q9BV10 488 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 ZNF442Q9H7R0 627 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 SMURF2Q9HAU4 748 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 FAM53CQ9NYF3 392 aa13.02□□□□□ -0.33
PHGDH-231ENST00000641939 A6NIZ1 184 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 VSTM5A8MXK1 200 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 B9A039 149 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 SSX4O60224 188 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 SLC2A10O95528 541 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 ZNF35P13682 527 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 CALB2P22676 271 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 NR4A1P22736 598 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 NUDT6P53370 316 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 SMIM11AP58511 58 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 RAP1BP61224 184 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 SNRPD2P62316 118 aaKnown RBP13.01□□□□□ -0.33
PHGDH-231ENST00000641939 RAP1AP62834 184 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 DAG1Q14118 895 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 RAB39AQ14964 217 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 EFNB3Q15768 340 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 ZBED5Q49AG3 693 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 THEM4Q5T1C6 240 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 KRT80Q6KB66 452 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 TMEM53Q6P2H8 277 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 DNM1P46Q6ZS02 220 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 SLC16A14Q7RTX9 510 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 ARHGAP24Q8N264 748 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 OR52J3Q8NH60 311 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 FGFBP3Q8TAT2 258 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 ZNF519Q8TB69 540 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 FNDC8Q8TC99 324 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 HTRA1Q92743 480 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 NMD3Q96D46 503 aaKnown RBP13.01□□□□□ -0.33
PHGDH-231ENST00000641939 TSPAN32Q96QS1 320 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 RBP7Q96R05 134 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 NDEL1Q9GZM8 345 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 KRCC1Q9NPI7 259 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-231ENST00000641939 ADAM21Q9UKJ8 722 aa13.01□□□□□ -0.33
PHGDH-231ENST00000641939 TRBV4-1A0A0J9YWV2 114 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 MGRN1O60291 552 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 SERPINA5P05154 406 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 CD14P08571 375 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 THBS4P35443 961 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 RPL4P36578 427 aaKnown RBP13□□□□□ -0.33
PHGDH-231ENST00000641939 OMPP47874 163 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 LIMS1P48059 325 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 ERVK-25P63136 954 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 MRPS34P82930 218 aaKnown RBP13□□□□□ -0.33
PHGDH-231ENST00000641939 SPIBQ01892 262 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 FMODQ06828 376 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 SNTB2Q13425 540 aaKnown RBP13□□□□□ -0.33
PHGDH-231ENST00000641939 SEC23BQ15437 767 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 SLC36A2Q495M3 483 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 SLC25A47Q6Q0C1 308 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 ZNF584Q8IVC4 421 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 ARIH2OSQ8N7S6 290 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 FUZQ9BT04 418 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 PLK3Q9H4B4 646 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 RNF121Q9H920 327 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 SIAEQ9HAT2 523 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 ACTR3BQ9P1U1 418 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 SPEF1Q9Y4P9 236 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 UGT2A1Q9Y4X1 527 aa13□□□□□ -0.33
PHGDH-231ENST00000641939 SONP18583 2426 aaKnown RBP13□□□□□ -0.33
PHGDH-231ENST00000641939 FN1P02751 2386 aaKnown RBP12.99□□□□□ -0.33
PHGDH-231ENST00000641939 IGKV1D-43A0A0B4J1Z2 117 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 SH3PXD2BA1X283 911 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 RNF223E7ERA6 249 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 PTP4A3O75365 173 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 NDUFB2O95178 105 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 GADD45GO95257 159 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 LY6G6DO95868 133 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 FABP3P05413 133 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 HEXAP06865 529 aa12.99□□□□□ -0.33
PHGDH-231ENST00000641939 ZNF26P17031 533 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms