RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 FOXN4Q96NZ1 517 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 TSSK2Q96PF2 358 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 C1QTNF6Q9BXI9 259 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 FN3KQ9H479 309 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 RERGLQ9H628 205 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 UGT2A1Q9Y4X1 527 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 SLC25A15Q9Y619 301 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 DOPEY2Q9Y3R5 2298 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 OR6C68A6NDL8 312 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 ZNF503-AS2A6NEH8 195 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 DCTN6O00399 190 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 SIAH2O43255 324 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 SLC16A7O60669 478 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 NR2C1P13056 603 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 EPHA2P29317 976 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 HOXC12P31275 282 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 GIPRP48546 466 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 ZNF84P51523 738 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 CDK5Q00535 292 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 DAG1Q14118 895 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 ZNF295-AS1Q8N0V1 137 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 PARP8Q8N3A8 854 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 C17orf78Q8N4C9 275 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 CBR4Q8N4T8 237 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 CYB561A3Q8NBI2 242 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 SLC37A3Q8NCC5 494 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 FNDC8Q8TC99 324 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 MUCL1Q96DR8 90 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 SLC29A1Q99808 456 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 RBM4BQ9BQ04 359 aaKnown RBP11.55□□□□□ -0.56
GTF3A-209ENST00000640289 RBM4Q9BWF3 364 aaKnown RBP11.55□□□□□ -0.56
GTF3A-209ENST00000640289 NUAK2Q9H093 628 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 RPRD1BQ9NQG5 326 aaKnown RBP11.55□□□□□ -0.56
GTF3A-209ENST00000640289 TMEM38BQ9NVV0 291 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 NPAP1Q9NZP6 1156 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 KCNN3Q9UGI6 736 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 BAIAP2Q9UQB8 552 aa11.55□□□□□ -0.56
GTF3A-209ENST00000640289 A0A1W2PPL8 197 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 CASKO14936 926 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 AHCYL1O43865 530 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 RENP00797 406 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 ALPLP05186 524 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 SCG5P05408 212 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 CRYGSP22914 178 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 GRK5P34947 590 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 POLR2IP36954 125 aaKnown RBP11.54□□□□□ -0.56
GTF3A-209ENST00000640289 CAPZA2P47755 286 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 ALDH3A2P51648 485 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 ESRRGP62508 458 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 CRMP1Q14194 572 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 PTGES3Q15185 160 aaKnown RBP11.54□□□□□ -0.56
GTF3A-209ENST00000640289 OTPQ5XKR4 325 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 SLC27A4Q6P1M0 643 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 ZNF627Q7L945 461 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 P2RY8Q86VZ1 359 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 SKA3Q8IX90 412 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 SLC22A24Q8N4F4 322 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 NPEPL1Q8NDH3 523 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 FGFBP3Q8TAT2 258 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 MARVELD3Q96A59 401 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 NABP1Q96AH0 204 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 EME1Q96AY2 570 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 SNX18Q96RF0 628 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 DDOQ99489 341 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 SH3GL3Q99963 347 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 USB1Q9BQ65 265 aaKnown RBP11.54□□□□□ -0.56
GTF3A-209ENST00000640289 C9orf16Q9BUW7 83 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 RIBC2Q9H4K1 309 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 SEC61A2Q9H9S3 476 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 SLC25A19Q9HC21 320 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 SLC24A3Q9HC58 644 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 SRA1Q9HD15 236 aaKnown RBP11.54□□□□□ -0.56
GTF3A-209ENST00000640289 CMC2Q9NRP2 79 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 ZNF226Q9NYT6 803 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 USE1Q9NZ43 259 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 ZNF224Q9NZL3 707 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 NKX1-2Q9UD57 310 aaPredicted RBP11.54□□□□□ -0.56
GTF3A-209ENST00000640289 COA3Q9Y2R0 106 aaPredicted RBP11.54□□□□□ -0.56
GTF3A-209ENST00000640289 AMDHD2Q9Y303 409 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 ICE1Q9Y2F5 2266 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 LRRK2Q5S007 2527 aa11.54□□□□□ -0.56
GTF3A-209ENST00000640289 ARPC4-TTLL3A0A0A6YYG9 625 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 FAM171A2A8MVW0 826 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 DEFB108AA8MXU0 73 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 KHDRBS3O75525 346 aaKnown RBP11.53□□□□□ -0.56
GTF3A-209ENST00000640289 GPANK1O95872 356 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 HLA-HP01893 362 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 PATE4P0C8F1 98 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 UBE2NP61088 152 aaKnown RBP11.53□□□□□ -0.56
GTF3A-209ENST00000640289 MRPS34P82930 218 aaKnown RBP11.53□□□□□ -0.56
GTF3A-209ENST00000640289 NPRL3Q12980 569 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 DAZAP2Q15038 168 aaPredicted RBP11.53□□□□□ -0.56
GTF3A-209ENST00000640289 TRIP10Q15642 601 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 SGCAQ16586 387 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 LRRC36Q1X8D7 754 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 LPCAT4Q643R3 524 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 ZBTB49Q6ZSB9 765 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 OR6V1Q8N148 313 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 LRRC18Q8N456 261 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 OR9Q1Q8NGQ5 310 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms