RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 REV1Q9UBZ9 1251 aa16.35■□□□□ 0.21
CLN6-221ENST00000637494 GPR160Q9UJ42 338 aa16.35■□□□□ 0.21
CLN6-221ENST00000637494 ADAM21Q9UKJ8 722 aa16.35■□□□□ 0.21
CLN6-221ENST00000637494 A4GNTQ9UNA3 340 aa16.35■□□□□ 0.21
CLN6-221ENST00000637494 ZANQ9Y493 2812 aa16.35■□□□□ 0.21
CLN6-221ENST00000637494 NPIPB13A6NJU9 1138 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 NPIPB4C9JG80 1138 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 STAMBPO95630 424 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 ZNF16P17020 682 aaPredicted RBP16.34■□□□□ 0.21
CLN6-221ENST00000637494 NUDT2P50583 147 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 HSF2Q03933 536 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 CD47Q08722 323 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 ANKDD1AQ495B1 522 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 FAM166AQ6J272 317 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 RGS7BPQ6MZT1 257 aaPredicted RBP16.34■□□□□ 0.21
CLN6-221ENST00000637494 OFCC1Q8IZS5 231 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 RBM15BQ8NDT2 890 aaKnown RBP16.34■□□□□ 0.21
CLN6-221ENST00000637494 UBASH3BQ8TF42 649 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 CMTM5Q96DZ9 223 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 RBP7Q96R05 134 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 SYT3Q9BQG1 590 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 NDEL1Q9GZM8 345 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 SHARPINQ9H0F6 387 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 TXNIPQ9H3M7 391 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 SMURF2Q9HAU4 748 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 DUSP13Q9UII6 198 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 ZNF346Q9UL40 294 aaKnown RBP16.34■□□□□ 0.21
CLN6-221ENST00000637494 KCNS2Q9ULS6 477 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 HIF3AQ9Y2N7 669 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 ARFGEF3Q5TH69 2177 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 TLN2Q9Y4G6 2542 aa16.34■□□□□ 0.21
CLN6-221ENST00000637494 ALPK2Q86TB3 2170 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 A0A1W2PPW3 197 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 ATP8B1O43520 1251 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 PIP5K1CO60331 668 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 LMX1BO60663 402 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 GMNNO75496 209 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 APLNRP35414 380 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 YAP1P46937 504 aaKnown RBP16.33■□□□□ 0.2
CLN6-221ENST00000637494 CHN2P52757 468 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 RUNX1T1Q06455 604 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 TOP3AQ13472 1001 aaPredicted RBP16.33■□□□□ 0.2
CLN6-221ENST00000637494 LAPTM4AQ15012 233 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 FXNQ16595 210 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 C10orf128Q5T292 105 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 FAM205BPQ63HN1 556 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 HACD2Q6Y1H2 254 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 VTCN1Q7Z7D3 282 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 RNF113BQ8IZP6 322 aaKnown RBP16.33■□□□□ 0.2
CLN6-221ENST00000637494 ZCCHC24Q8N2G6 241 aaKnown RBP16.33■□□□□ 0.2
CLN6-221ENST00000637494 ZNF786Q8N393 782 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 LRRC18Q8N456 261 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 FGFBP3Q8TAT2 258 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 FAM162AQ96A26 154 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 SEPHS2Q99611 448 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 KCTD14Q9BQ13 255 aaPredicted RBP16.33■□□□□ 0.2
CLN6-221ENST00000637494 BPESC1Q9GZL8 116 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 NSRP1Q9H0G5 558 aaKnown RBP16.33■□□□□ 0.2
CLN6-221ENST00000637494 TPK1Q9H3S4 243 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 SIAEQ9HAT2 523 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 RHCGQ9UBD6 479 aa16.33■□□□□ 0.2
CLN6-221ENST00000637494 LOC100289279A0A1B0GTE1 492 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 NME4O00746 187 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 TSPAN19P0C672 248 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 ZNF23P17027 643 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 GIFP27352 417 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 RAD52P43351 418 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 RPL27P61353 136 aaKnown RBP16.32■□□□□ 0.2
CLN6-221ENST00000637494 MRPS34P82930 218 aaKnown RBP16.32■□□□□ 0.2
CLN6-221ENST00000637494 ARMC4Q5T2S8 1044 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 ZNF730Q6ZMV8 503 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 CBLL1Q75N03 491 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 OAFQ86UD1 273 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 ZNF584Q8IVC4 421 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 NRMQ8IXM6 262 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 ELAC2Q9BQ52 826 aaKnown RBP16.32■□□□□ 0.2
CLN6-221ENST00000637494 ALG12Q9BV10 488 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 RPS6KA6Q9UK32 745 aa16.32■□□□□ 0.2
CLN6-221ENST00000637494 IGHV4-61A0A0C4DH41 118 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 A6NIZ1 184 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 EFCAB9A8MZ26 197 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 SLC2A10O95528 541 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 SERPINA1P01009 418 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 LCKP06239 509 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 FAM157CP0CG43 387 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 HNF1AP20823 631 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 SLC9A3P48764 834 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 GSK3BP49841 420 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 ZNF133P52736 654 aaPredicted RBP16.31■□□□□ 0.2
CLN6-221ENST00000637494 CTXN1P60606 82 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 RAP1BP61224 184 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 RAP1AP62834 184 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 PRKCDQ05655 676 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 SGCAQ16586 387 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 MOGQ16653 247 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 NKPD1Q17RQ9 610 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 THEM4Q5T1C6 240 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 UGT2A3Q6UWM9 527 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 UNQ6126/PRO20091Q6UXV3 157 aa16.31■□□□□ 0.2
CLN6-221ENST00000637494 SNX33Q8WV41 574 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms