RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 SNX33Q8WV41 574 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 SPRYD4Q8WW59 207 aaPredicted RBP6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 ZNRF4Q8WWF5 429 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 GATAD2BQ8WXI9 593 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 ASB17Q8WXJ9 295 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 UFD1Q92890 307 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 C12orf43Q96C57 262 aaKnown RBP6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 INTS12Q96CB8 462 aaKnown RBP6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 NMD3Q96D46 503 aaKnown RBP6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 TXNDC15Q96J42 360 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 UCN2Q96RP3 112 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 TBX5Q99593 518 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 ARHGAP9Q9BRR9 750 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 ZNF649Q9BS31 505 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 EMC6Q9BV81 110 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 TMUB1Q9BVT8 246 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 MRPL13Q9BYD1 178 aaKnown RBP6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 NAA50Q9GZZ1 169 aaKnown RBP6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 RERGLQ9H628 205 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 EXO5Q9H790 373 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 WDR76Q9H967 626 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 TRIM36Q9NQ86 728 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 BABAM2Q9NXR7 383 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 PTTG2Q9NZH5 202 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 KLHL9Q9P2J3 617 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 MCTS1Q9ULC4 181 aaKnown RBP6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 RCE1Q9Y256 329 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 CSAG2Q9Y5P2 127 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 HEATR5AQ86XA9 2040 aa6.72□□□□□ -1.33
PTP4A1-206ENST00000627002 CPAMD8Q8IZJ3 1885 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 IGHV3-15A0A0B4J1V0 119 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 TVP23AA6NH52 213 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 TRIM64BA6NI03 449 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 HSPB2A8KAH6 182 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 J3QLW9 94 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 GPR171O14626 319 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 AIREO43918 545 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 RAMP1O60894 148 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 IGHG3P01860 377 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 HRGP04196 525 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 TACSTD2P09758 323 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 CPN1P15169 458 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 ZNF823P16415 610 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 ZNF19P17023 458 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 CD53P19397 219 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 KLK2P20151 261 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 PSMA1P25786 263 aaKnown RBP6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 PTGS2P35354 604 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 CSNK1A1P48729 337 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 GBX2P52951 348 aaPredicted RBP6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 TMPRSS3P57727 454 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 ZNF85Q03923 595 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 SRYQ05066 204 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 EGR3Q06889 387 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 RASGEF1BQ0VAM2 473 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 MRPL28Q13084 256 aaKnown RBP6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 CAMK2DQ13557 499 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 GPR50Q13585 617 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 HSPB2Q16082 182 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 CTF1Q16619 201 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 HIST3H3Q16695 136 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 VASNQ6EMK4 673 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 RPUSD3Q6P087 351 aaKnown RBP6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 GDPGP1Q6ZNW5 385 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 PLEKHG7Q6ZR37 379 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 Q6ZS92 163 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 SLC16A12Q6ZSM3 486 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 KLBQ86Z14 1044 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 GLB1L2Q8IW92 636 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 PHC2Q8IXK0 858 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 ZNF511Q8NB15 262 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 OR6N2Q8NGY6 317 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 C4orf36Q96KX1 117 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 OR2M2Q96R28 347 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 DEFB127Q9H1M4 99 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 NDUFB11Q9NX14 153 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 GLTPQ9NZD2 209 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 EMC3Q9P0I2 261 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 KCNG2Q9UJ96 466 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 LAMP5Q9UJQ1 280 aa6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 COA3Q9Y2R0 106 aaPredicted RBP6.71□□□□□ -1.34
PTP4A1-206ENST00000627002 KNTC1P50748 2209 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 IGKV3D-15A0A087WSY6 115 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 A0A1B0GVC2 190 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 METTL15A6NJ78 407 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 ZNF716A6NP11 495 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 ZNF593O00488 134 aaPredicted RBP6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 AQP7O14520 342 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 TMCC2O75069 709 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 SLC43A1O75387 559 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 SULT1C4O75897 302 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 AQP8O94778 261 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 ATE1O95260 518 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 CRYABP02511 175 aaKnown RBP6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 ITGB2P05107 769 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 KRT8P05787 483 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 GAAP10253 952 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 GADD45AP24522 165 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 LAP3P28838 519 aa6.7□□□□□ -1.34
PTP4A1-206ENST00000627002 GABRA5P31644 462 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms