RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 C20orf196Q8IYI0 205 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 GCNT2Q8N0V5 402 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 FNDC8Q8TC99 324 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 KISS1RQ969F8 398 aaPredicted RBP15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 TMEM54Q969K7 222 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 ZMYND19Q96E35 227 aaPredicted RBP15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 DOK1Q99704 481 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 TP63Q9H3D4 680 aaPredicted RBP15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 PAK1IP1Q9NWT1 392 aaPredicted RBP15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 GLTPQ9NZD2 209 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 MOKQ9UQ07 419 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 ZNF835Q9Y2P0 537 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 PHF3Q92576 2039 aaKnown RBP15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 COL6A6A6NMZ7 2263 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 IGLV1-36A0A0B4J1U3 117 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 EFCAB10A6NFE3 127 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 ATXN7O15265 892 aaPredicted RBP15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 SS18L1O75177 396 aaPredicted RBP15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 GLCEO94923 617 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 APOL3O95236 402 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 QDPRP09417 244 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 PEX19P40855 299 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 SLC15A1P46059 708 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 TMED1Q13445 227 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 RAB39AQ14964 217 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 ETFDHQ16134 617 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 HIST3H3Q16695 136 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 OR2A2Q6IF42 318 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 ZBTB46Q86UZ6 589 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 SPARTQ8N0X7 666 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 IPCEF1Q8WWN9 437 aaPredicted RBP15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 SGCDQ92629 289 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 NSMAFQ92636 917 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 MCHR2Q969V1 340 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 INTS12Q96CB8 462 aaKnown RBP15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 COPS4Q9BT78 406 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 VCX3AQ9NNX9 186 aa15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 FOXD3Q9UJU5 478 aaPredicted RBP15.77■□□□□ 0.12
PTCHD3-202ENST00000622555 EPG5Q9HCE0 2579 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 IGKV1D-43A0A0B4J1Z2 117 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 MBD3L4A6NDZ8 208 aaPredicted RBP15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 MBD3L3A6NE82 208 aaPredicted RBP15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 CCDC160A6NGH7 325 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 TRIM64BA6NI03 449 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 MBD3L5A6NJ08 208 aaPredicted RBP15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 KHDRBS3O75525 346 aaKnown RBP15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 DCKP27707 260 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 ATP6V1E1P36543 226 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 SLC35A2P78381 396 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 ROR2Q01974 943 aaKnown RBP15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 PHYHD1Q5SRE7 291 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 NUFIP2Q7Z417 695 aaKnown RBP15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 DOLPP1Q86YN1 238 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 ZNF100Q8IYN0 542 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 GPR137CQ8N3F9 429 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 OR51G2Q8NGK0 314 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 OR13F1Q8NGS4 319 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 MBD3L2Q8NHZ7 208 aaPredicted RBP15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 ZNF420Q8TAQ5 688 aaPredicted RBP15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 LGALS12Q96DT0 336 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 FOXN4Q96NZ1 517 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 ULBP2Q9BZM5 246 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 RACGAP1Q9H0H5 632 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 DUSP21Q9H596 190 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 CNOT2Q9NZN8 540 aaKnown RBP15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 PCDHGB1Q9Y5G3 927 aa15.77■□□□□ 0.11
PTCHD3-202ENST00000622555 SEC14L2O76054 403 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 PIPP12273 146 aaPredicted RBP15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 PER3P56645 1201 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 SIRPAP78324 504 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 PIGFQ07326 219 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 ST3GAL4Q11206 333 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 KLHL22Q53GT1 634 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 LINC01590Q5TEZ4 76 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 LRFN4Q6PJG9 635 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 SEM1Q6ZVN7 128 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 SHFQ7M4L6 423 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 STX19Q8N4C7 294 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 RPRMLQ8N4K4 120 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 ST6GALNAC3Q8NDV1 305 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 MYDGFQ969H8 173 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 APH1AQ96BI3 265 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 SLCO5A1Q9H2Y9 848 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 C12orf49Q9H741 205 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 CCNB1IP1Q9NPC3 277 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 B3GAT2Q9NPZ5 323 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 FKBP14Q9NWM8 211 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 ERVK-18Q9QC07 812 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 SH3BGRL2Q9UJC5 107 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 TINAGQ9UJW2 476 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 COA3Q9Y2R0 106 aaPredicted RBP15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 EMC9Q9Y3B6 208 aa15.76■□□□□ 0.11
PTCHD3-202ENST00000622555 INTS1Q8N201 2190 aaKnown RBP15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 IRGMA1A4Y4 181 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 MRPS14O60783 128 aaKnown RBP15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 UPK3AO75631 287 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 KRT33AO76009 404 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 GPANK1O95872 356 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 HLA-DQA2P01906 255 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms