RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 CHRFAM7AQ494W8 412 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 USP51Q70EK9 711 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 FAM57BQ71RH2 274 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 ADAMTS14Q8WXS8 1223 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 DNASE2BQ8WZ79 361 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 TCEAL3Q969E4 200 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 RADILQ96JH8 1075 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 C10orf90Q96M02 699 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 GALNT9Q9HCQ5 603 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 POU2F3Q9UKI9 436 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 CES1P1Q9UKY3 287 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 NYNRINQ9P2P1 1898 aaKnown RBP12.63□□□□□ -0.39
CIITA-213ENST00000618327 IGHV5-10-1A0A0J9YXX1 117 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 HPGDSO60760 199 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 CLPPQ16740 277 aaPredicted RBP12.63□□□□□ -0.39
CIITA-213ENST00000618327 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.63□□□□□ -0.39
CIITA-213ENST00000618327 ATAD3CQ5T2N8 411 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 AGAP7PQ5VUJ5 663 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 TMEM99Q8N816 258 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 BBS1Q8NFJ9 593 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 TM4SF19Q96DZ7 209 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 PILRAQ9UKJ1 303 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 KLF13Q9Y2Y9 288 aaPredicted RBP12.63□□□□□ -0.39
CIITA-213ENST00000618327 PDGFBP01127 241 aaPredicted RBP12.63□□□□□ -0.39
CIITA-213ENST00000618327 ARL3P36405 182 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 DIO1P49895 249 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 SPOCK1Q08629 439 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 RIN1Q13671 783 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 GALEQ14376 348 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 BEND4Q6ZU67 534 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 ZADH2Q8N4Q0 377 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 DEFB124Q8NES8 71 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 TMEM106AQ96A25 262 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 IL20Q9NYY1 176 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 TDRD6O60522 2096 aaKnown RBP12.63□□□□□ -0.39
CIITA-213ENST00000618327 SC5DO75845 299 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 CCL4P13236 92 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 NAGAP17050 411 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 SHC1P29353 583 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 THBS2P35442 1172 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 HTR5AP47898 357 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 ZFP36L2P47974 494 aaKnown RBP12.63□□□□□ -0.39
CIITA-213ENST00000618327 GP2P55259 537 aaKnown RBP12.63□□□□□ -0.39
CIITA-213ENST00000618327 PSG6Q00889 435 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 Q499Y3 187 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 PAQR6Q6TCH4 344 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 P4HTMQ9NXG6 502 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 ABRACLQ9P1F3 81 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 B3GALT5Q9Y2C3 310 aa12.63□□□□□ -0.39
CIITA-213ENST00000618327 MEIOCA2RUB1 952 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 ANKUB1A6NFN9 424 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 NCR1O76036 304 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 MPIG6BO95866 241 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 IFNA5P01569 189 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 ARSBP15848 533 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 ABOP16442 354 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 PRSS3P35030 304 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 ACTBP60709 375 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 ACTG1P63261 375 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 ZNF117Q03924 483 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 FOXF1Q12946 379 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 EBPQ15125 230 aaKnown RBP12.62□□□□□ -0.39
CIITA-213ENST00000618327 P2RY14Q15391 338 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 LAIR1Q6GTX8 287 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 GSG1LQ6UXU4 331 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 SLC25A45Q8N413 288 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 STK35Q8TDR2 534 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 VSTM2LQ96N03 204 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 SYNPO2LQ9H987 977 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 EMC9Q9Y3B6 208 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 TRDV1A0A1B0GX56 115 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 B8ZZF3 427 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 PRSS23O95084 383 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 TFP02787 698 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 GABREP78334 506 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 ALKBH1Q13686 389 aaKnown RBP12.62□□□□□ -0.39
CIITA-213ENST00000618327 TRIP6Q15654 476 aaKnown RBP12.62□□□□□ -0.39
CIITA-213ENST00000618327 TMPRSS11FQ6ZWK6 438 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 SERPINA12Q8IW75 414 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 DND1Q8IYX4 353 aaKnown RBP12.62□□□□□ -0.39
CIITA-213ENST00000618327 CLDN22Q8N7P3 220 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 TMEM52Q8NDY8 209 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 ARL11Q969Q4 196 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 C3orf49Q96BT1 292 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 SLC52A3Q9NQ40 469 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 MYOTQ9UBF9 498 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 SPDEFO95238 335 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 DUSP2Q05923 314 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 ZNF141Q15928 474 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 OGFOD3Q6PK18 319 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 DCXRQ7Z4W1 244 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 PLPP5Q8NEB5 264 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 TBC1D15Q8TC07 691 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 RHNO1Q9BSD3 238 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 MENTQ9BUN1 341 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 NIPAL2Q9H841 368 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 ALG1L2C9J202 215 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 CRTAPO75718 401 aaPredicted RBP12.62□□□□□ -0.39
CIITA-213ENST00000618327 OR8U9P0C7N5 309 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 PTPN6P29350 595 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms