RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 NR1H2P55055 460 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 EMX1Q04741 257 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 TBCEQ15813 527 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 ETFDHQ16134 617 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 ACSF3Q4G176 576 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 PHYHD1Q5SRE7 291 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 C10orf128Q5T292 105 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 DNM1P34Q6PK57 102 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 LYPD4Q6UWN0 246 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 KCTD8Q6ZWB6 473 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 SHFQ7M4L6 423 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 AAED1Q7RTV5 226 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 TIGD4Q8IY51 512 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 SVOPQ8N4V2 548 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 OR5M9Q8NGP3 310 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 ZNF775Q96BV0 537 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 SNRNP40Q96DI7 357 aaKnown RBP13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 CNN2Q99439 309 aaKnown RBP13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 PRRG4Q9BZD6 226 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 CCDC90BQ9GZT6 254 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 TAS2R16Q9NYV7 291 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 EXOSC1Q9Y3B2 195 aaKnown RBP13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 COMMD3-BMI1R4GMX3 469 aa13.06□□□□□ -0.32
SHKBP1-211ENST00000595945 ERVH48-1M5A8F1 160 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 SELENOFO60613 162 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 SLC43A1O75387 559 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 NR2C1P13056 603 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 RPL5P46777 297 aaKnown RBP13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 ETV1P50549 477 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 GUSBP1Q15486 140 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 PRR30Q53SZ7 412 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 CARD17Q5XLA6 110 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 NSUN5P2Q63ZY6 315 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 FOXL2NBQ6ZUU3 175 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 TUSC5Q8IXB3 177 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 ZNF511Q8NB15 262 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 OR6K6Q8NGW6 343 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 WNT2BQ93097 391 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 MCHR2Q969V1 340 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 MUL1Q969V5 352 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 CALHM2Q9HA72 323 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 ACOT13Q9NPJ3 140 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 INPP5EQ9NRR6 644 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 MRPL22Q9NWU5 206 aaKnown RBP13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 CLEC2DQ9UHP7 191 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 COA3Q9Y2R0 106 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 LSM2Q9Y333 95 aaKnown RBP13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 RTTNQ86VV8 2226 aa13.05□□□□□ -0.32
SHKBP1-211ENST00000595945 TMEM129A0AVI4 362 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 TVP23AA6NH52 213 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 CD8B2A6NJW9 211 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 SS18L1O75177 396 aaPredicted RBP13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 GPANK1O95872 356 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 PTHP01270 115 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 HRGP04196 525 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 MRPL3P09001 348 aaKnown RBP13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 UBE2UQ5VVX9 321 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 SLC16A9Q7RTY1 509 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 CDC20BQ86Y33 519 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 SLC35F2Q8IXU6 374 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 ACBD7Q8N6N7 88 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 NANOGP1Q8N7R0 232 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 SLC26A10Q8NG04 563 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 FAM57AQ8TBR7 257 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 WBP1Q96G27 269 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 TRIB1Q96RU8 372 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 LINC00470Q9BZP3 86 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 RERGLQ9H628 205 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 GLRX2Q9NS18 164 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 ASF1BQ9NVP2 202 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 PARPBPQ9NWS1 579 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 ERVK13-1Q9NX77 482 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 CLEC4AQ9UMR7 237 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 NOSIPQ9Y314 301 aaKnown RBP13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 UGT2A1Q9Y4X1 527 aa13.04□□□□□ -0.32
SHKBP1-211ENST00000595945 C12orf71A8MTZ7 269 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 WDR1O75083 606 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 MRPL33O75394 65 aaKnown RBP13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 UPK3AO75631 287 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 LCKP06239 509 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 QDPRP09417 244 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 OR2T7P0C7T2 308 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 PSKH1P11801 424 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 EDNRAP25101 427 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 AGTR1P30556 359 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 PTGER4P35408 488 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 ATP6V1E1P36543 226 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 NAA10P41227 235 aaPredicted RBP13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 ACTC1P68032 377 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 ACTA1P68133 377 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 ZNF85Q03923 595 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 HSF2Q03933 536 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 GLO1Q04760 184 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 DOC2BQ14184 412 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 SF3B4Q15427 424 aaKnown RBP eCLIP13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 KCNMB1Q16558 191 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 PCK2Q16822 640 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 RIPPLY2Q5TAB7 128 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 RTL6Q6ICC9 239 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 NUFIP2Q7Z417 695 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms