RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 M0R233 179 aa20.2■□□□□ 0.82
LSM4-204ENST00000594828 CXCR6O00574 342 aa20.2■□□□□ 0.82
LSM4-204ENST00000594828 GSTA4O15217 222 aa20.2■□□□□ 0.82
LSM4-204ENST00000594828 LMX1BO60663 402 aa20.2■□□□□ 0.82
LSM4-204ENST00000594828 IFI30P13284 250 aa20.2■□□□□ 0.82
LSM4-204ENST00000594828 ALG10Q5BKT4 473 aa20.2■□□□□ 0.82
LSM4-204ENST00000594828 BPIFA2Q96DR5 249 aa20.2■□□□□ 0.82
LSM4-204ENST00000594828 FNDC11Q9BVV2 318 aa20.2■□□□□ 0.82
LSM4-204ENST00000594828 BEX2Q9BXY8 128 aa20.2■□□□□ 0.82
LSM4-204ENST00000594828 TXNIPQ9H3M7 391 aa20.2■□□□□ 0.82
LSM4-204ENST00000594828 RHCGQ9UBD6 479 aa20.2■□□□□ 0.82
LSM4-204ENST00000594828 HIF3AQ9Y2N7 669 aa20.2■□□□□ 0.82
LSM4-204ENST00000594828 SNX13Q9Y5W8 968 aa20.2■□□□□ 0.82
LSM4-204ENST00000594828 SLC22A23A1A5C7 686 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 NPIPB13A6NJU9 1138 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 NPIPB4C9JG80 1138 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 MGRN1O60291 552 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 ZNF682O95780 498 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 PTHP01270 115 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 IFNW1P05000 195 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 ZNF23P17027 643 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 SLC7A2P52569 658 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 ZNF133P52736 654 aaPredicted RBP20.19■□□□□ 0.82
LSM4-204ENST00000594828 PLP2Q04941 152 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 C10orf128Q5T292 105 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 LRP11Q86VZ4 500 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 LRRC18Q8N456 261 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 HDAC2Q92769 488 aaKnown RBP20.19■□□□□ 0.82
LSM4-204ENST00000594828 C1orf198Q9H425 327 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 CDH20Q9HBT6 801 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 DUSP13Q9UII6 198 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 FZR1Q9UM11 496 aa20.19■□□□□ 0.82
LSM4-204ENST00000594828 LOC100289279A0A1B0GTE1 492 aa20.18■□□□□ 0.82
LSM4-204ENST00000594828 J3KTA2 159 aa20.18■□□□□ 0.82
LSM4-204ENST00000594828 NME4O00746 187 aa20.18■□□□□ 0.82
LSM4-204ENST00000594828 CCL2P13500 99 aa20.18■□□□□ 0.82
LSM4-204ENST00000594828 FUT4P22083 530 aa20.18■□□□□ 0.82
LSM4-204ENST00000594828 TRAM2Q15035 370 aa20.18■□□□□ 0.82
LSM4-204ENST00000594828 TAF11Q15544 211 aa20.18■□□□□ 0.82
LSM4-204ENST00000594828 FAM166AQ6J272 317 aa20.18■□□□□ 0.82
LSM4-204ENST00000594828 OFCC1Q8IZS5 231 aa20.18■□□□□ 0.82
LSM4-204ENST00000594828 RBM15BQ8NDT2 890 aaKnown RBP20.18■□□□□ 0.82
LSM4-204ENST00000594828 OR1J2Q8NGS2 313 aa20.18■□□□□ 0.82
LSM4-204ENST00000594828 GEMIN6Q8WXD5 167 aaKnown RBP20.18■□□□□ 0.82
LSM4-204ENST00000594828 MSI2Q96DH6 328 aaKnown RBP20.18■□□□□ 0.82
LSM4-204ENST00000594828 KCNN2Q9H2S1 579 aa20.18■□□□□ 0.82
LSM4-204ENST00000594828 SIAEQ9HAT2 523 aa20.18■□□□□ 0.82
LSM4-204ENST00000594828 SMURF2Q9HAU4 748 aa20.18■□□□□ 0.82
LSM4-204ENST00000594828 IQCMA0A1B0GVH7 501 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 SLC2A10O95528 541 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 FAM157BP0CG42 384 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 FAM157CP0CG43 387 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 SAGP10523 405 aaPredicted RBP20.17■□□□□ 0.82
LSM4-204ENST00000594828 NR2C1P13056 603 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 TCN1P20061 433 aaPredicted RBP20.17■□□□□ 0.82
LSM4-204ENST00000594828 ALDH3B1P43353 468 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 SEC24CP53992 1094 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 MRPS34P82930 218 aaKnown RBP20.17■□□□□ 0.82
LSM4-204ENST00000594828 CD47Q08722 323 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 TOP3AQ13472 1001 aaPredicted RBP20.17■□□□□ 0.82
LSM4-204ENST00000594828 TBC1D28Q2M2D7 210 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 IFI44LQ53G44 452 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 RGS7BPQ6MZT1 257 aaPredicted RBP20.17■□□□□ 0.82
LSM4-204ENST00000594828 C8orf82Q6P1X6 216 aaPredicted RBP20.17■□□□□ 0.82
LSM4-204ENST00000594828 HACD2Q6Y1H2 254 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 FKBP9P1Q75LS8 142 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 CBLL1Q75N03 491 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 TREML1Q86YW5 311 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 NRMQ8IXM6 262 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 PAQR4Q8N4S7 273 aaPredicted RBP20.17■□□□□ 0.82
LSM4-204ENST00000594828 SHARPINQ9H0F6 387 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 LRMDAQ9H2I8 198 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 MAN2C1Q9NTJ4 1040 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 MYEF2Q9P2K5 600 aaKnown RBP20.17■□□□□ 0.82
LSM4-204ENST00000594828 LPAR3Q9UBY5 353 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 KCNS2Q9ULS6 477 aa20.17■□□□□ 0.82
LSM4-204ENST00000594828 LRP5LA4QPB2 252 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 LYNX1G3V0Z9 82 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 NDUFAB1O14561 156 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 FFAR1O14842 300 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 LYNX1P0DP58 116 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 MAKP20794 623 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 CDAP32320 146 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 GSK3BP49841 420 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 NUDT2P50583 147 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 CTXN1P60606 82 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 RPL27P61353 136 aaKnown RBP20.16■□□□□ 0.82
LSM4-204ENST00000594828 PRKCDQ05655 676 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 MAD2L1BPQ15013 274 aaPredicted RBP20.16■□□□□ 0.82
LSM4-204ENST00000594828 CXXC5Q7LFL8 322 aaKnown RBP20.16■□□□□ 0.82
LSM4-204ENST00000594828 ARIH2OSQ8N7S6 290 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 OR51A7Q8NH64 312 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 NSMAFQ92636 917 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 NMD3Q96D46 503 aaKnown RBP20.16■□□□□ 0.82
LSM4-204ENST00000594828 RBP7Q96R05 134 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 ZNF346Q9UL40 294 aaKnown RBP20.16■□□□□ 0.82
LSM4-204ENST00000594828 UGT2A1Q9Y4X1 527 aa20.16■□□□□ 0.82
LSM4-204ENST00000594828 A0A1W2PPW3 197 aa20.15■□□□□ 0.82
LSM4-204ENST00000594828 LILRA1O75019 489 aa20.15■□□□□ 0.82
LSM4-204ENST00000594828 SNAP29O95721 258 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms