RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 TOP3AQ13472 1001 aaPredicted RBP23.57■■□□□ 1.36
SMAD4-213ENST00000591914 EFNB3Q15768 340 aa23.57■■□□□ 1.36
SMAD4-213ENST00000591914 VHLLQ6RSH7 139 aa23.57■■□□□ 1.36
SMAD4-213ENST00000591914 RRM2BQ7LG56 351 aa23.57■■□□□ 1.36
SMAD4-213ENST00000591914 IGFN1Q86VF2 1251 aa23.57■■□□□ 1.36
SMAD4-213ENST00000591914 OR4K5Q8NGD3 323 aa23.57■■□□□ 1.36
SMAD4-213ENST00000591914 TMEM5Q9Y2B1 443 aa23.57■■□□□ 1.36
SMAD4-213ENST00000591914 B9A039 149 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 LY6G6DO95868 133 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 HEXAP06865 529 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 PATE4P0C8F1 98 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 ZNF35P13682 527 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 THBS4P35443 961 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 NUDT6P53370 316 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 FAM205BPQ63HN1 556 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 DPPA2Q7Z7J5 298 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 ZNF519Q8TB69 540 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 HTRA1Q92743 480 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 NSMCE2Q96MF7 247 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 FAM53CQ9NYF3 392 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 ZNF346Q9UL40 294 aaKnown RBP23.56■■□□□ 1.36
SMAD4-213ENST00000591914 UGT2A1Q9Y4X1 527 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 V9GYQ6 96 aa23.56■■□□□ 1.36
SMAD4-213ENST00000591914 NSD1Q96L73 2696 aaPredicted RBP23.56■■□□□ 1.36
SMAD4-213ENST00000591914 DIRAS1O95057 198 aa23.55■■□□□ 1.36
SMAD4-213ENST00000591914 SLC2A10O95528 541 aa23.55■■□□□ 1.36
SMAD4-213ENST00000591914 NR2C1P13056 603 aa23.55■■□□□ 1.36
SMAD4-213ENST00000591914 ITGA2P17301 1181 aa23.55■■□□□ 1.36
SMAD4-213ENST00000591914 NR4A1P22736 598 aa23.55■■□□□ 1.36
SMAD4-213ENST00000591914 SNRPD2P62316 118 aaKnown RBP23.55■■□□□ 1.36
SMAD4-213ENST00000591914 ZBED5Q49AG3 693 aa23.55■■□□□ 1.36
SMAD4-213ENST00000591914 FGD3Q5JSP0 725 aa23.55■■□□□ 1.36
SMAD4-213ENST00000591914 ZNF584Q8IVC4 421 aa23.55■■□□□ 1.36
SMAD4-213ENST00000591914 CCDC197Q8NCU1 140 aa23.55■■□□□ 1.36
SMAD4-213ENST00000591914 TSPAN32Q96QS1 320 aa23.55■■□□□ 1.36
SMAD4-213ENST00000591914 FUZQ9BT04 418 aa23.55■■□□□ 1.36
SMAD4-213ENST00000591914 ALG12Q9BV10 488 aa23.55■■□□□ 1.36
SMAD4-213ENST00000591914 PLK3Q9H4B4 646 aa23.55■■□□□ 1.36
SMAD4-213ENST00000591914 IGKV1D-43A0A0B4J1Z2 117 aa23.54■■□□□ 1.36
SMAD4-213ENST00000591914 TRBV4-1A0A0J9YWV2 114 aa23.54■■□□□ 1.36
SMAD4-213ENST00000591914 RNF223E7ERA6 249 aa23.54■■□□□ 1.36
SMAD4-213ENST00000591914 MGRN1O60291 552 aa23.54■■□□□ 1.36
SMAD4-213ENST00000591914 SERPINA5P05154 406 aa23.54■■□□□ 1.36
SMAD4-213ENST00000591914 ZNF26P17031 533 aaPredicted RBP23.54■■□□□ 1.36
SMAD4-213ENST00000591914 LIMS1P48059 325 aa23.54■■□□□ 1.36
SMAD4-213ENST00000591914 EFNA4P52798 201 aa23.54■■□□□ 1.36
SMAD4-213ENST00000591914 MRPS34P82930 218 aaKnown RBP23.54■■□□□ 1.36
SMAD4-213ENST00000591914 FMODQ06828 376 aa23.54■■□□□ 1.36
SMAD4-213ENST00000591914 CD47Q08722 323 aa23.54■■□□□ 1.36
SMAD4-213ENST00000591914 SNTB2Q13425 540 aaKnown RBP23.54■■□□□ 1.36
SMAD4-213ENST00000591914 DAG1Q14118 895 aa23.54■■□□□ 1.36
SMAD4-213ENST00000591914 RAB39AQ14964 217 aa23.54■■□□□ 1.36
SMAD4-213ENST00000591914 FAM46AQ96IP4 442 aaKnown RBP23.54■■□□□ 1.36
SMAD4-213ENST00000591914 NSL1Q96IY1 281 aa23.54■■□□□ 1.36
SMAD4-213ENST00000591914 REG4Q9BYZ8 158 aa23.54■■□□□ 1.36
SMAD4-213ENST00000591914 A6NIZ1 184 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 B2RBV5 119 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 NPR2P20594 1047 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 OMPP47874 163 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 RAP1BP61224 184 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 RAP1AP62834 184 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 SEC23BQ15437 767 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 SLC36A2Q495M3 483 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 KRT80Q6KB66 452 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 SLC25A47Q6Q0C1 308 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 Q71RC1 249 aaPredicted RBP23.53■■□□□ 1.36
SMAD4-213ENST00000591914 SLC16A14Q7RTX9 510 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 ARIH2OSQ8N7S6 290 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 FNDC8Q8TC99 324 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 SIAEQ9HAT2 523 aa23.53■■□□□ 1.36
SMAD4-213ENST00000591914 VSTM5A8MXK1 200 aa23.52■■□□□ 1.36
SMAD4-213ENST00000591914 THEM4Q5T1C6 240 aa23.52■■□□□ 1.36
SMAD4-213ENST00000591914 CLDN22Q8N7P3 220 aa23.52■■□□□ 1.36
SMAD4-213ENST00000591914 OR10H5Q8NGA6 315 aa23.52■■□□□ 1.36
SMAD4-213ENST00000591914 NABP1Q96AH0 204 aa23.52■■□□□ 1.36
SMAD4-213ENST00000591914 TLN2Q9Y4G6 2542 aa23.52■■□□□ 1.35
SMAD4-213ENST00000591914 PTP4A3O75365 173 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 F12P00748 615 aaPredicted RBP23.51■■□□□ 1.35
SMAD4-213ENST00000591914 CD14P08571 375 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 CDAP32320 146 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 SMIM11AP58511 58 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 DSCR9P59020 149 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 ERVK-25P63136 954 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 TMEM53Q6P2H8 277 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 CLEC2AQ6UVW9 174 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 OR52J3Q8NH60 311 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 MCUR1Q96AQ8 359 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 RBP7Q96R05 134 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 RHNO1Q9BSD3 238 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 FBXO9Q9UK97 447 aaPredicted RBP23.51■■□□□ 1.35
SMAD4-213ENST00000591914 SIGLEC7Q9Y286 467 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 ADAM18Q9Y3Q7 739 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 SPEF1Q9Y4P9 236 aa23.51■■□□□ 1.35
SMAD4-213ENST00000591914 CSPG4Q6UVK1 2322 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 SH3PXD2BA1X283 911 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 MMP7P09237 267 aaPredicted RBP23.5■■□□□ 1.35
SMAD4-213ENST00000591914 RPL4P36578 427 aaKnown RBP23.5■■□□□ 1.35
SMAD4-213ENST00000591914 PPOXP50336 477 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 FAM122BQ7Z309 247 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 ARHGAP24Q8N264 748 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms