RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 OR6X1Q8NH79 312 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 HAS2Q92819 552 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 CDADC1Q9BWV3 514 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 RNF32Q9H0A6 362 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.71■□□□□ 0.43
TRIM47-204ENST00000587339 MMP27Q9H306 513 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 KLHL13Q9P2N7 655 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 ST6GALNAC2Q9UJ37 374 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 POLHQ9Y253 713 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 NCKAP5O14513 1909 aa17.71■□□□□ 0.42
TRIM47-204ENST00000587339 PRR32B1ATL7 298 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 PHYHO14832 338 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 INHBBP09529 407 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 CCL11P51671 97 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 BMXP51813 675 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 INSL4Q14641 139 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 TRAM1Q15629 374 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 THEM4Q5T1C6 240 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 OTPQ5XKR4 325 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 HBMQ6B0K9 141 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 RPL22L1Q6P5R6 122 aaKnown RBP17.7■□□□□ 0.42
TRIM47-204ENST00000587339 FAM220AQ7Z4H9 259 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 EGFL6Q8IUX8 553 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 SMIM19Q96E16 107 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 PGLYRP3Q96LB9 341 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 UCN2Q96RP3 112 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 KCNN2Q9H2S1 579 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 TPK1Q9H3S4 243 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 SNTG1Q9NSN8 517 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 KCNG2Q9UJ96 466 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 A3GALT2U3KPV4 340 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 IGKV1D-43A0A0B4J1Z2 117 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 CD8B2A6NJW9 211 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 ZNF726A6NNF4 738 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 LINC01387J3KSC0 135 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 OGG1O15527 345 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 KHDRBS3O75525 346 aaKnown RBP17.7■□□□□ 0.42
TRIM47-204ENST00000587339 RGS9O75916 674 aaPredicted RBP17.7■□□□□ 0.42
TRIM47-204ENST00000587339 CDRT1O95170 752 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 IL1AP01583 271 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 KRT8P05787 483 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 HPNP05981 417 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 SPARCP09486 303 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 PGA4P0DJD7 388 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 PGA3P0DJD8 388 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 CD8BP10966 210 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 OPRL1P41146 370 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 STARP49675 285 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 AGFG1P52594 562 aaKnown RBP17.7■□□□□ 0.42
TRIM47-204ENST00000587339 CARD18P57730 90 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 PLGLB1Q02325 96 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 MXD1Q05195 221 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 EGR3Q06889 387 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 CDK5R1Q15078 307 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 NOXO1Q8NFA2 376 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 SLC26A10Q8NG04 563 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 GHSRQ92847 366 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 SRXN1Q9BYN0 137 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 C6orf62Q9GZU0 229 aaPredicted RBP17.7■□□□□ 0.42
TRIM47-204ENST00000587339 ING1Q9UK53 422 aaPredicted RBP17.7■□□□□ 0.42
TRIM47-204ENST00000587339 IKZF2Q9UKS7 526 aa17.7■□□□□ 0.42
TRIM47-204ENST00000587339 PTPRZ1P23471 2315 aaPredicted RBP17.69■□□□□ 0.42
TRIM47-204ENST00000587339 TRBV2A0A0J9YWF9 115 aa17.69■□□□□ 0.42
TRIM47-204ENST00000587339 SULT1C4O75897 302 aa17.69■□□□□ 0.42
TRIM47-204ENST00000587339 OR8G3PP0DMU2 310 aa17.69■□□□□ 0.42
TRIM47-204ENST00000587339 ENPP1P22413 925 aa17.69■□□□□ 0.42
TRIM47-204ENST00000587339 EDNRAP25101 427 aa17.69■□□□□ 0.42
TRIM47-204ENST00000587339 PTGS2P35354 604 aa17.69■□□□□ 0.42
TRIM47-204ENST00000587339 PSMB10P40306 273 aa17.69■□□□□ 0.42
TRIM47-204ENST00000587339 MAGEA5P43359 124 aa17.69■□□□□ 0.42
TRIM47-204ENST00000587339 CDC20Q12834 499 aa17.69■□□□□ 0.42
TRIM47-204ENST00000587339 POU4F3Q15319 338 aa17.69■□□□□ 0.42
TRIM47-204ENST00000587339 MEP1BQ16820 701 aa17.69■□□□□ 0.42
TRIM47-204ENST00000587339 TMEM91Q6ZNR0 172 aa17.69■□□□□ 0.42
TRIM47-204ENST00000587339 OR6Q1Q8NGQ2 317 aa17.69■□□□□ 0.42
TRIM47-204ENST00000587339 MRM2Q9UI43 246 aaKnown RBP17.69■□□□□ 0.42
TRIM47-204ENST00000587339 ZNF891A8MT65 544 aaPredicted RBP17.68■□□□□ 0.42
TRIM47-204ENST00000587339 FAM166BA8MTA8 275 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 NPIPA2E9PIF3 369 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 NPIPA3F8WFD2 350 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 MPZL1O95297 269 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 FREM3P0C091 2139 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 PSKH1P11801 424 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 SDC2P34741 201 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 MEOX1P50221 254 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 GDI2P50395 445 aaKnown RBP17.68■□□□□ 0.42
TRIM47-204ENST00000587339 RORCP51449 518 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 CLDN17P56750 224 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 DCTN2Q13561 401 aaKnown RBP17.68■□□□□ 0.42
TRIM47-204ENST00000587339 CARD17Q5XLA6 110 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 SLC18B1Q6NT16 456 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 CREB3L2Q70SY1 520 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 MS4A15Q8N5U1 240 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 YIPF7Q8N8F6 280 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 NEIL3Q8TAT5 605 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 NSMAFQ92636 917 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 NXF2Q9GZY0 626 aaKnown RBP17.68■□□□□ 0.42
TRIM47-204ENST00000587339 SLC24A3Q9HC58 644 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 CELA3AP09093 270 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 ZNF823P16415 610 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms