RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 MGMTP16455 207 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 GDF1P27539 372 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 COL9A2Q14055 689 aaPredicted RBP12.01□□□□□ -0.49
RNF43-208ENST00000584437 ANGPTL5Q86XS5 388 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 SYS1Q8N2H4 156 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 ZNF561Q8N587 486 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 C2CD4CQ8TF44 421 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 HPSE2Q8WWQ2 592 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 PDCD1LG2Q9BQ51 273 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 CLSTN3Q9BQT9 956 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 SPACA1Q9HBV2 294 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 URGCP-MRPS24S4R325 110 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 CCSO14618 274 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 CNMDO75829 334 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 UTS2O95399 124 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 SOD1P00441 154 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 CPN1P15169 458 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 ACKR3P25106 362 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 CLDN17P56750 224 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 C17orf67Q0P5P2 114 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 TMEM176BQ3YBM2 270 aaPredicted RBP12.01□□□□□ -0.49
RNF43-208ENST00000584437 ABHD17CQ6PCB6 329 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 TMEM207Q6UWW9 146 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 GABRG1Q8N1C3 465 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 OR5D18Q8NGL1 313 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 P2RY12Q9H244 342 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 FKRPQ9H9S5 495 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 CMC2Q9NRP2 79 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 IGLV3-10A0A075B6K4 115 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 ZNF195O14628 629 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 B3GALNT1O75752 331 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 SLC19A1P41440 591 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 MRPL19P49406 292 aaKnown RBP12.01□□□□□ -0.49
RNF43-208ENST00000584437 FCRL6Q6DN72 434 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 ZNF740Q8NDX6 193 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 LHX6Q9UPM6 363 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 CBY1Q9Y3M2 126 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 RICTORQ6R327 1708 aa12.01□□□□□ -0.49
RNF43-208ENST00000584437 THBS1P07996 1170 aa12□□□□□ -0.49
RNF43-208ENST00000584437 NPPBP16860 134 aa12□□□□□ -0.49
RNF43-208ENST00000584437 CD80P33681 288 aa12□□□□□ -0.49
RNF43-208ENST00000584437 NKX2-1P43699 371 aaPredicted RBP12□□□□□ -0.49
RNF43-208ENST00000584437 SLC6A11P48066 632 aa12□□□□□ -0.49
RNF43-208ENST00000584437 BIDP55957 195 aa12□□□□□ -0.49
RNF43-208ENST00000584437 SLC10A1Q14973 349 aa12□□□□□ -0.49
RNF43-208ENST00000584437 AANATQ16613 207 aa12□□□□□ -0.49
RNF43-208ENST00000584437 ADAMTSL4Q6UY14 1074 aa12□□□□□ -0.49
RNF43-208ENST00000584437 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12□□□□□ -0.497e-12■■■■□ 23.4
RNF43-208ENST00000584437 ZC3HAV1Q7Z2W4 902 aaKnown RBP12□□□□□ -0.49
RNF43-208ENST00000584437 ANKRD53Q8N9V6 530 aa12□□□□□ -0.49
RNF43-208ENST00000584437 C12orf57Q99622 126 aa12□□□□□ -0.49
RNF43-208ENST00000584437 SPNS1Q9H2V7 528 aa12□□□□□ -0.49
RNF43-208ENST00000584437 NKX2-4Q9H2Z4 354 aa12□□□□□ -0.49
RNF43-208ENST00000584437 PLK3Q9H4B4 646 aa12□□□□□ -0.49
RNF43-208ENST00000584437 PLEKHF2Q9H8W4 249 aa12□□□□□ -0.49
RNF43-208ENST00000584437 ZMAT3Q9HA38 289 aaKnown RBP12□□□□□ -0.49
RNF43-208ENST00000584437 OR5H14A6NHG9 310 aa12□□□□□ -0.49
RNF43-208ENST00000584437 TXNDC12O95881 172 aa12□□□□□ -0.49
RNF43-208ENST00000584437 SOWAHCQ53LP3 525 aaPredicted RBP12□□□□□ -0.49
RNF43-208ENST00000584437 LRRC18Q8N456 261 aa12□□□□□ -0.49
RNF43-208ENST00000584437 OPALINQ96PE5 141 aa12□□□□□ -0.49
RNF43-208ENST00000584437 C20orf24Q9BUV8 137 aa12□□□□□ -0.49
RNF43-208ENST00000584437 PLEKHA2Q9HB19 425 aa12□□□□□ -0.49
RNF43-208ENST00000584437 SLC25A19Q9HC21 320 aa12□□□□□ -0.49
RNF43-208ENST00000584437 HRASLSQ9HDD0 168 aa12□□□□□ -0.49
RNF43-208ENST00000584437 OSGIN2Q9Y236 505 aa12□□□□□ -0.49
RNF43-208ENST00000584437 PTRH2Q9Y3E5 179 aaKnown RBP12□□□□□ -0.49
RNF43-208ENST00000584437 TBPP20226 339 aa12□□□□□ -0.49
RNF43-208ENST00000584437 MAOBP27338 520 aa12□□□□□ -0.49
RNF43-208ENST00000584437 TMED6Q8WW62 240 aa12□□□□□ -0.49
RNF43-208ENST00000584437 DUSP22Q9NRW4 184 aa12□□□□□ -0.49
RNF43-208ENST00000584437 PPP1R14DQ9NXH3 145 aa12□□□□□ -0.49
RNF43-208ENST00000584437 CHRNA9Q9UGM1 479 aa12□□□□□ -0.49
RNF43-208ENST00000584437 CHST2Q9Y4C5 530 aa12□□□□□ -0.49
RNF43-208ENST00000584437 CDC14CA4D256 554 aa12□□□□□ -0.49
RNF43-208ENST00000584437 HSPB2A8KAH6 182 aa12□□□□□ -0.49
RNF43-208ENST00000584437 EIF1BO60739 113 aaKnown RBP12□□□□□ -0.49
RNF43-208ENST00000584437 CYTIPO60759 359 aa12□□□□□ -0.49
RNF43-208ENST00000584437 NPBWR1P48145 328 aa12□□□□□ -0.49
RNF43-208ENST00000584437 YPEL5P62699 121 aa12□□□□□ -0.49
RNF43-208ENST00000584437 UBE2IP63279 158 aaKnown RBP12□□□□□ -0.49
RNF43-208ENST00000584437 H3F3AP84243 136 aa12□□□□□ -0.49
RNF43-208ENST00000584437 ACVR1Q04771 509 aa12□□□□□ -0.49
RNF43-208ENST00000584437 ZP2Q05996 745 aa12□□□□□ -0.49
RNF43-208ENST00000584437 HSPB2Q16082 182 aa12□□□□□ -0.49
RNF43-208ENST00000584437 MANEAQ5SRI9 462 aa12□□□□□ -0.49
RNF43-208ENST00000584437 LIPNQ5VXI9 398 aa12□□□□□ -0.49
RNF43-208ENST00000584437 OR5M10Q6IEU7 315 aa12□□□□□ -0.49
RNF43-208ENST00000584437 AAED1Q7RTV5 226 aa12□□□□□ -0.49
RNF43-208ENST00000584437 RASD2Q96D21 266 aa12□□□□□ -0.49
RNF43-208ENST00000584437 DCBLD2Q96PD2 775 aa12□□□□□ -0.49
RNF43-208ENST00000584437 SRRQ9GZT4 340 aa12□□□□□ -0.49
RNF43-208ENST00000584437 RNF150Q9ULK6 438 aa12□□□□□ -0.49
RNF43-208ENST00000584437 PCDHB10Q9UN67 800 aa12□□□□□ -0.49
RNF43-208ENST00000584437 KIR2DS1A0A191URI9 304 aa12□□□□□ -0.49
RNF43-208ENST00000584437 PRPH2P23942 346 aa12□□□□□ -0.49
RNF43-208ENST00000584437 ARNTP27540 789 aa12□□□□□ -0.49
RNF43-208ENST00000584437 RAD52P43351 418 aa12□□□□□ -0.49
RNF43-208ENST00000584437 KIR2DS4P43632 304 aa12□□□□□ -0.49
RNF43-208ENST00000584437 TPBGQ13641 420 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms